Reaction center purple bacteria

Several laboratories now make use of the ultrafast continuum pump-probe technique in the study of ultrafast processes in biological molecules or molecular complexes.Notable molecules and complexes under study are the photosynthetic reaction centers of purple bacteria, the reaction centers of photosystems I and II of green plants. 

U. Finkele, K. Dressier and W. Zinth,Analysis of transient absorption data from reaction centers of purple bacteria, in Reaction centers of photosynthetic bacteria, ed. M.E. Michel-Beyerle, Springer Series in Biophysics Vol. 6 (1990)... 

Breton J, Martin J-L, Fleming G R and Lambry J-C 1988 Low-temperature femtosecond spectroscopy of the initial step of electron transfer in reaction centers from photosynthetic purple bacteria Biochemistry 27 8276... 

The light-harvesting complex LHl is directly associated with the reaction center in purple bacteria and is therefore referred to as the core or inner antenna, whereas LH2 is known as the peripheral antenna. Both are huilt up from hydrophohic a and p polypeptides of similar size and with low hut significant sequence similarity. The two histidines that hind to chlorophyll with absorption maxima at 850 nm in the periplasmic ring of LH2 are also present in LHl, but the sequence involved in binding the third chlorophyll in LH2 is quite different in LHl. Not surprisingly, the chlorophyll molecules of the periplasmic ring are present in LHl but the chlorophyll molecules with the 800 nm absorption maximum are absent. 

Michel, H., Deisenhofer, J. Relevance of the photosynthetic reaction center from purple bacteria to the structure of photosystem II. BicKhemistry 27 1-7, 1988. 

The photosynthetic reaction center (RC) of purple nonsulfur bacteria is the core molecular assembly, located in a membrane of the bacteria, that initiates a series of electron transfer reactions subsequent to energy transfer events. The bacterial photosynthetic RCs have been characterized in more detail, both structurally and functionally, than have other transmembrane protein complexes [1-52]. 

Photosystem II (Fig. 1) bears many similarities to the much simpler reaction center of purple bacteria. Remarkable is, however, the increase in complexity at the protein level. In a recent review on the evolutionary development of the type 11 reaction centres340 this was attributed to the invention of water-splitting by PS II and the necessity to protect and repair the photosynthetic machinery against the harmful effects of molecular oxygen. The central part of PS II and the bRC show a highly conserved cofactor arrangement,19 see Fig. 1. These cofactors are arranged in two branches bound to two protein subunits, L/M and D1/D2 in bRC and PS II, respectively. On the donor side a closely related pair of chlorophylls or bacteriochlorophylls exists the acceptors comprise monomeric chlorophylls, pheophytins (Ph) and 2 quinones QA and QB. Qa and Qb are plas-... 

Photosynthetic bacteria have relatively simple phototransduction machinery, with one of two general types of reaction center. One type (found in purple bacteria) passes electrons through pheophytin (chlorophyll lacking the central Mg2+ ion) to a quinone. The other (in green sulfur bacteria) passes electrons through a quinone to an iron-sulfur center. Cyanobacteria and plants have two photosystems (PSI, PSII), one of each type, acting in tandem. Biochemical and biophysical... 

The three-dimensional structures of the reaction centers of purple bacteria (Rhodopseudomonas viridis and Rhodobacter sphaeroides), deduced from x-ray crystallography, shed light on how phototransduction takes place in a pheophytin-quinone reaction center. The R. viridis reaction center (Fig. 19-48a) is a large protein complex containing four polypeptide subunits and 13 cofactors two pairs of bacterial chlorophylls, a pair of pheophytins, two quinones, a nonheme iron, and four hemes in the associated c-type cytochrome. 

The Fe-S Reaction Center (Type I Reaction Center) Photosynthesis in green sulfur bacteria involves the same three modules as in purple bacteria, but the process differs in several respects and involves additional enzymatic reactions (Fig. 19-47b). Excitation causes an electron to move from the reaction center to the cytochrome bei complex via a quinone carrier. Electron transfer through this complex powers proton transport and creates the proton-motive force used for ATP synthesis, just as in purple bacteria and in mitochondria. 

However, in contrast to the cyclic flow of electrons in purple bacteria, some electrons flow from the reaction center to an iron-sulfur protein, ferredoxin, which then passes electrons via ferredoxin NAD reductase to NAD+, producing NADH. The electrons taken from the reaction center to reduce NAD+ are replaced by the oxidation of H2S to elemental S, then to SOf, in the reaction that defines the green sulfur bacteria. This oxidation of H2S by bacteria is chemically analogous to the oxidation of H20 by oxygenic plants. 

Bacteria have a single reaction center in purple bacteria, it is of the pheophytin-quinone type, and in green sulfur bacteria, the Fe-S type. 

A short, intermediate-level review of the structure and function of the light-harvesting complex of the purple bacteria and exci-ton flow to the reaction center. 

Deisenhofer, J. Michel, H. (1991) Structures of bacterial photosynthetic reaction centers. Annu. Rev. Cell Biol. 7, 1-23. Description of the structure of the reaction center of purple bacteria and implications for the function of bacterial and plant reaction centers. 

There are many systems of different complexity ranging from diatomics to biomolecules (the sodium dimer, oxazine dye molecules, the reaction center of purple bacteria, the photoactive yellow protein, etc.) for which coherent oscillatory responses have been observed in the time and frequency gated (TFG) spontaneous emission (SE) spectra (see, e.g., [1] and references therein). In most cases, these oscillations are characterized by a single well-defined vibrational frequency, It is therefore logical to anticipate that a single optically active mode is responsible for these features, so that the description in terms of few-electronic-states-single-vibrational-mode system Hamiltonian may be appropriate. 

Wavepacket motion is now routinely observed in systems ranging from the very simple to the very complex. In the latter category, we note that coherent vibrational motion on functionally significant time scales has been observed in the photosynthetic reaction center [15], bacteriorhodopsin [16], rhodopsin [17], and light-harvesting antenna of purple bacteria (LH1) [18-20]. Particularly striking are the results of Zadoyan et al. [21] on the... 

Many cytochromes c are soluble but others are bound to membranes or to other proteins. A well-studied tetraheme protein binds to the reaction centers of many purple and green bacteria and transfers electrons to those photosynthetic centers.118 120 Cytochrome c2 plays a similar role in Rhodobacter, forming a complex of known three-dimensional structure.121 Additional cytochromes participate in both cyclic and noncyclic electron transport in photosynthetic bacteria and algae (see Chapter 23).120,122 124 Some bacterial membranes as well as those of mitochondria contain a cytochrome bct complex whose structure is shown in Fig. 18-8.125,126... 

Bacterial photosynthesis. What is the relationship of the Z scheme of Fig. 23-17 to bacterial photosyntheses In photoheterotrophs, such as the purple Rhodospirillum, organic compounds, e.g., succinate, serve as electron donors in Eq. 23-30. Because they can utilize organic compounds for growth, these bacteria have a relatively low requirement for NADPH or other photochemically generated reductants and a larger need for ATP. Their photosynthetic reaction centers receive electrons via cytochrome c from succinate (E° ... 

V). The centers resemble PSII of chloroplasts and have a high midpoint electrode potential E° of 0.46 V. The initial electron acceptor is the Mg2+-free bacteriopheophytin (see Fig. 23-20) whose midpoint potential is -0.7 V. Electrons flow from reduced bacteriopheophytin to menaquinone or ubiquinone or both via a cytochrome bct complex, similar to that of mitochondria, then back to the reaction center P870. This is primarily a cyclic process coupled to ATP synthesis. Needed reducing equivalents can be formed by ATP-driven reverse electron transport involving electrons removed from succinate. Similarly, the purple sulfur bacteria can use electrons from H2S. 

Figure 23-27 Illustration of proposed exciton transfer of the energy of light absorbed by bacteriochlorophyll a of purple bacteria. Energy absorbed by the light harvesting complex LH2 is transferred in steps to another LH2, to LH1 and to the reaction center. The short lines within the circles represent the edges of the BChla chromophores. After Kiihlbrandt300 with permission.

Reaction centers of purple bacteria. The exact composition varies, but the properties of reaction centers from several genera of purple bacteria are similar. In Rhodopseudomonas viridis there are three peptide chains designated H, M, and L (for heavy, medium and light) with molecular masses of 33,28, and 24 kDa, respectively. Together with a 38-kDa tetraheme cytochrome (which is absent from isolated reaction centers of other species) they form a 1 1 1 1 complex. This constitutes reaction center P870. The three-dimensional structure of this entire complex has been determined to 0.23-nm resolution288 319 323 (Fig. 23-31). In addition to the 1182 amino acid residues there are four molecules of bacteriochlorophyll (BChl), two of bacteriopheophytin (BPh), a molecule of menaquinone-9, an atom of nonheme iron, and four molecules of heme in the c type cytochrome. In 1984, when the structure was determined by Deisenhofer and Michel, this was the largest and most complex object whose atomic structure had been described. It was also one of the first known structures for a membrane protein. The accomplishment spurred an enormous rush of new photosynthesis research, only a tiny fraction of which can be mentioned here. 

Figure 23-32 Simplified diagram of cyclic electron flow in purple bacteria. Two protons from the cytoplasm bind to QB2 in the reaction center to form QH2 (ubiquinol), which diffuses into the ubiquinone pool. From there it is dehydrogenated by the cytochrome kq complex with expulsion of two protons into the periplasm. A third and possibly a fourth proton may be pumped (green arrows) across the membrane, e.g., via the Q cycle (Fig. 18-9). The protons are returned to the cytoplasm through ATP synthase with formation of ATP. Some electrons may flow to the reaction centers from such reduced substrates as S2 and some electrons may be removed to generate NADPH using reverse electron transport.345...

Cyclic photophosphorylation in purple bacteria. QH2 is eventually dehydrogenated in the cytochrome bc1 complex, and the electrons can be returned to the reaction center by the small soluble cytochrome c2, where it reduces the bound tetraheme cytochrome or reacts directly with the special pair in Rhodobacter spheroides. The overall reaction provides for a cyclic photophosphorylation (Fig. 23-32) that pumps 3-4 H+ across the membrane into the periplasmic space utilizing the energy of the two photoexcited electrons. 

Reaction centers of purple bacteria typically contain three polypeptides, four molecules of bacteriochlorophyll, two bacteriopheophytins, two quinones, and one nonheme iron atom. In some bacterial species, both quinones are ubiquinone. In others, one of the quinones is menaquinone (vitamin K2), a naphthoquinone that resembles ubiquinone in having a long side chain (fig. 15.10). Reaction centers of some species, such as Rhodopseudomonas viridis, also have a cytochrome subunit with four c-type hemes. 

Although the structures of the plant reaction centers are not yet known in detail, photosystem II reaction centers resemble reaction centers of purple bacteria in several ways. The amino acid sequences of their two major polypeptides are homologous to those of the two polypeptides that hold the pigments in the bacterial reaction center. Also, the reaction centers of photosystem II contain a nonheme iron atom and two molecules of plastoquinone, a quinone that is closely related to ubiquinone (see fig. 15.10), and they contain one or more molecules of pheophytin a and several... 

In purple photosynthetic bacteria, electrons return to P870+ from the quinones QA and QB via a cyclic pathway. When QB is reduced with two electrons, it picks up protons from the cytosol and diffuses to the cytochrome bct complex. Here it transfers one electron to an iron-sulfur protein and the other to a 6-type cytochrome and releases protons to the extracellular medium. The electron-transfer steps catalyzed by the cytochrome 6c, complex probably include a Q cycle similar to that catalyzed by complex III of the mitochondrial respiratory chain (see fig. 14.11). The c-type cytochrome that is reduced by the iron-sulfur protein in the cytochrome be, complex diffuses to the reaction center, where it either reduces P870+ directly or provides an electron to a bound cytochrome that reacts with P870+. In the Q cycle, four protons probably are pumped out of the cell for every two electrons that return to P870. This proton translocation creates an electrochemical potential gradient across the membrane. Protons move back into the cell through an ATP-synthase, driving the formation of ATP. 

If the reaction centers of photosystem I and photosystem II are segregated into separate regions of the thylakoid membrane, how can electrons move from photosystem I to photosystem II Evidently the plastoquinone that is reduced in photosystem II can diffuse rapidly in the membrane, just as ubiquinone does in the mitochondrial inner membrane. Plastoquinone thus carries electrons from photosystem II to the cytochrome b6f complex. Plastocyanin acts similarly as a mobile electron carrier from the cytochrome b f complex to the reaction center of photosystem I, just as cytochrome c carries electrons from the mitochondrial cytochrome bct complex to cytochrome oxidase and as a c-type cytochrome provides electrons to the reaction centers of purple bacteria (see fig. 15.13). 

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