Triazines protonation

For a series of 1,2,4-triazines, protonation constants for the first and second stages (pKBH-f, pKBH2-b) were determined in aqueous solution using a spectrophotometric procedure <2003CHE616>. Thermodynamic aspects for N-protonation and N-alkylation of 1,2,4-triazines are discussed in detail in Section 9.02.5.5. 

Garver JM, Yang Z, Kato S, Wren SW, Vogelhuber KM, Lineberger WC, Bierbaum VM. Gas phase reactions of 1,3,5-triazine proton transfer, hydride transfer, and anionic o-adduct formation. JAm Soc Mass Spectrom. 2011 22 1260-72. 

In this solvent the reaction is catalyzed by small amounts of trimethyl-amine and especially pyridine (cf. 9). The same effect occurs in the reaction of iV -methylaniline with 2-iV -methylanilino-4,6-dichloro-s-triazine. In benzene solution, the amine hydrochloride is so insoluble that the reaction could be followed by recovery. of the salt. However, this precluded study mider Bitter and Zollinger s conditions of catalysis by strong mineral acids in the sense of Banks (acid-base pre-equilibrium in solution). Instead, a new catalytic effect was revealed when the influence of organic acids was tested. This was assumed to depend on the bifunctional character of these catalysts, which act as both a proton donor and an acceptor in the transition state. In striking agreement with this conclusion, a-pyridone is very reactive and o-nitrophenol is not. Furthermore, since neither y-pyridone nor -nitrophenol are active, the structure of the catalyst must meet the conformational requirements for a cyclic transition state. Probably a concerted process involving structure 10 in the rate-determining step... 

The catalytic effect of protons has been noted on many occasions (cf. Section II,D,2,c) and autocatalysis frequently occurs when the nucleophile is not a strong base. Acid catalysis of reactions with water, alcohols, mercaptans, amines, or halide ions has been observed for halogeno derivatives of pyridine, pyrimidine (92), s-triazine (93), quinoline, and phthalazine as well as for many other ring systems and leaving groups. An interesting displacement is that of a 4-oxo group in the reaction of quinolines with thiophenols, which is made possible by the acid catalysis. 

The catalytic effect of protons, of bifunctional catalysts, and of base is demonstrated in the amination of chloro derivatives of pyridazine, pyrimidine, and s-triazine (Tables V and VI). Anilino-s-triazines containing NH groups act as catalysts in their own formation. The catalytic action of protons on anhino-dechlorination of 2-chloro-4,6-diamino-s-triazine and of 2-amino-4-chloropyrimidine was reported in the classic paper by Banks. ... 

Chemical Shifts S of the Cyclic Protons in the h NMR Spectra of 1,2,4-Triazines AND Their W-Oxides in CDCI3 (A) or DMSO- Is (B) in Comparison (A ) with Those of the Parent 1, 2,4-Triazines... 

The reaction of 1,2,4-triazine 4-oxides 55 with CH-active 1,3-diketones (dime-done, indanedione, iV.iV -dimethylbarbituric acid) in the presence of trifluoroacetic acid (substrate activation by protonation) or KOH (activation of the nucleophile) leads to stable cr -adducts 63, whose oxidative aromatization by the action of KMn04 results in 5-substituted 1,2,4-triazine 4-oxides 64 (98MI). 

The reaction of 3-methoxy-1,2,4-triazine 1-oxide 20 with the carbanion generated from chloromethyl phenyl sulfone proceeds as the vicarious nucleophilic substitution (VNS) of hydrogen (Scheme 1, path B) via addition of the carbanion at position 5 of the heterocycle. Following base-induced elimination of HCl and protonation, 3-methoxy-5-phenylsulfonyl-1,2,4-triazine 4-oxides 65 result (88LA627). 

Most reported triazine LC applications are reversed-phase utilizing C-8 and C-18 analytical columns, but there are also a few normal-phase (NH2,CN) and ion-exchange (SCX) applications. The columns used range from 5 to 25-cm length and from 2 to 4.6-mm i.d., depending on the specific application. In general, the mobile phases employed for reversed-phase applications consist of various methanol and/or acetonitrile combinations in water. The ionization efficiency of methanol and acetonitrile for atmospheric pressure chemical ionization (APcI) applications were compared, and based on methanol s lower proton affinity, the authors speculated that more compounds could be ionized in the positive ion mode when using methanol than acetonitrile in the mobile phase. 

It also follows that protonation of the triazine ring makes it more susceptible to attack by nucleophilic reagents unless the reagent itself is also protonated. If the triazine ring remains unprotonated when a nucleophilic base, such as an alkylamine, is present as its acid salt the reaction is slower, of course. Cyanuric chloride itself is a very weak base that becomes protonated only under strongly acidic conditions. Thus step 1 in Scheme 11.2 can be carried out in aqueous solution even at pH 2 without risk of undesirable hydrolysis of cyanuric chloride, water being an extremely weak nucleophile. 

This agrees quite well with the rate constants for intramolecular proton transfer in 2,4-bis(dimethyl-amino )-6-(2-hydroxy-5-methylphenyl)-5-triazine which had been measured by Shizuka et al. ( l6) using laser picosecond spectroscopy. The fluorescence decay constant t of (TIN) was found to be 60 20 ps. Because of the weak intensity all fluorescence lifetimes refer to the pure substance in crystalline form at room temperature. 

Among its inhibitors are methotrexate (MTX), trimethoprim, and other derivatives of pyrimidines, triazines, pteridines, and related heterocyclic compounds. Some of these inhibitors, such as MTX, bind more tightly to Escherichia coli enzyme than does the substrate dihydrofolate. This fact has been attributed to ion-pair formation between protonated MTX and a negative carboxyl, presumably Asp-27, as well as to hydrophobic interactions.33... 

The fact that N1 is preferentially protonated is in agreement with crystal data obtained for free triazines and enzyme-bound triazines in ternary complex with enzyme and enzyme cofactor (NADPH)45 and also with the difference spectroscopy evidence46 that the N1 of the DHFR-bound MTX is protonated. 

The 11 NMR spectrum (500MHz) of 3-(4-chloro-phenyl)-7-ethyl-7,9-dimethyl-2,3,4,9-tetrahydropyrimido[l,2-tf]-[l,3,5]triazine-6,8-dione 49 <2002JHC663> showed the presence of quartets (AB pattern) at 6 4.99 and 6 5.12 corresponding to the methylene protons of the triazine ring. 

Fluorescence and luminescence spectroscopic studies on imidazo[l,2- ][l,2,4]triazines 54 have been published by a Russian team <1994ZOB327, 1994ZOB497>. The experimental data reveal that protonation of 54 can take place either on N-4 or on N-5 and is strongly dependent on the solvent used. 

The H+ and NH forms of homoionic montmorillonite promote the hydrolysis of chloro-s-triazines to the hydroxy analogs (hydroxy-s-triazines) (73). Apparently, the surface acidity of these clays was extremely high, since no degradation was observed in control experiments conducted at pH 3.5 in homogeneous aqueous solution. Russell et al. (73) suggested that the hydroxy-s-triazine products were stabilized in the protonated form at the silicate surface. The IR spectra of these surface complexes agreed with the spectra obtained in 6N HC1, and it was inferred that the pH at the clay surface was 3 to 4 units lower than that measured in suspension. 

---