Thermodynamics protonation

For roughly 30 years, enamine protonation has been believed to proceed following equation 18, according to which a fast step involving nitrogen protonation (kinetic protonation) is followed by a subsequent rearrangement step to a supposedly more stable iminium cation (thermodynamic protonation). 

The turnover rate is used as an effect or signal to monitor the protonation, and thus the observed rates can be used to analyse the thermodynamic protonation equilibria. In the general case, every species would be assigned an intensity factor, and the signal (observed rate of the reaction) would be the sum of all of these factors. 

In Vogel s studies, the [2.2.1] oxabicydic substrate 244 was found to undergo reductive ring opening as well as thermodynamic protonation to furnish a cyclohexanol, Eq. 149 [197]. 

The use of more effective protecting groups, N-demethylation, diazotization of amines derived from cyanide reduction, Grignard displacement of cyanide, all proved fruitless. Rapoport then returned to enamine 145 and, in keeping with Evans observations, found that both kinetic and thermodynamic protonation, to trans and cis immonium salts respectively, was possible (see also Scheme 14). However, attempted... 

Agrawal YK and Patel DR, Thermodynamic proton-ligand and metal-ligand stability constants of some drugs, /. Pharm. Sci.,... 

The thermodynamic proton-ligand (pJ a) metal-ligand stability constants of clioquinol, clofibrate, nitrofurazone, and tetracycline with Cu", Zn, Mn", Mg" and Ca" have been determined at 35 °C in 50% ethanol-water media. An empirical pH correction for... 

EtOH Agrawal YK and Patel DR, Thermodynamic proton-ligand and... 

In alkylidyne complexes that bear no ir-acid co-ligands, thermodynamic protonation occurs either on the alkylidyne face or at the metal, and steric considerations are invoked to explain the preference. Sub-stoichiometric quantities of H2O or HCl catalyse the tautomerisation of TpW( = C Bu)Cl(NHPh) to the corresponding imido alkylidene complex TpW( = CH Bu)Cl( = NR). The first step in the tautomerisation is, however, suggested to involve protonation of the amide group (Scheme 45) since weaker donors (i.e., those with electron-withdrawing... 

Stem layer adsorption was involved in the discussion of the effect of ions on f potentials (Section V-6), electrocapillary behavior (Section V-7), and electrode potentials (Section V-8) and enters into the effect of electrolytes on charged monolayers (Section XV-6). More speciflcally, this type of behavior occurs in the adsorption of electrolytes by ionic crystals. A large amount of wotk of this type has been done, partly because of the importance of such effects on the purity of precipitates of analytical interest and partly because of the role of such adsorption in coagulation and other colloid chemical processes. Early studies include those by Weiser [157], by Paneth, Hahn, and Fajans [158], and by Kolthoff and co-workers [159], A recent calorimetric study of proton adsorption by Lyklema and co-workers [160] supports a new thermodynamic analysis of double-layer formation. A recent example of this is found in a study... 

The ketone is added to a large excess of a strong base at low temperature, usually LDA in THF at -78 °C. The more acidic and less sterically hindered proton is removed in a kineti-cally controlled reaction. The equilibrium with a thermodynamically more stable enolate (generally the one which is more stabilized by substituents) is only reached very slowly (H.O. House, 1977), and the kinetic enolates may be trapped and isolated as silyl enol ethers (J.K. Rasmussen, 1977 H.O. House, 1969). If, on the other hand, a weak acid is added to the solution, e.g. an excess of the non-ionized ketone or a non-nucleophilic alcohol such as cert-butanol, then the tautomeric enolate is preferentially formed (stabilized mostly by hyperconjugation effects). The rate of approach to equilibrium is particularly slow with lithium as the counterion and much faster with potassium or sodium. 

An interesting case are the a,/i-unsaturated ketones, which form carbanions, in which the negative charge is delocalized in a 5-centre-6-electron system. Alkylation, however, only occurs at the central, most nucleophilic position. This regioselectivity has been utilized by Woodward (R.B. Woodward, 1957 B.F. Mundy, 1972) in the synthesis of 4-dialkylated steroids. This reaction has been carried out at high temperature in a protic solvent. Therefore it yields the product, which is formed from the most stable anion (thermodynamic control). In conjugated enones a proton adjacent to the carbonyl group, however, is removed much faster than a y-proton. If the same alkylation, therefore, is carried out in an aprotic solvent, which does not catalyze tautomerizations, and if the temperature is kept low, the steroid is mono- or dimethylated at C-2 in comparable yield (L. Nedelec, 1974). 

The following acid-catalyzed cyclizations leading to steroid hormone precursors exemplify some important facts an acetylenic bond is less nucleophilic than an olelinic bond acetylenic bonds tend to form cyclopentane rather than cyclohexane derivatives, if there is a choice in proton-catalyzed olefin cyclizations the thermodynamically most stable Irons connection of cyclohexane rings is obtained selectively electroneutral nucleophilic agents such as ethylene carbonate can be used to terminate the cationic cyclization process forming stable enol derivatives which can be hydrolyzed to carbonyl compounds without this nucleophile and with trifluoroacetic acid the corresponding enol ester may be obtained (M.B. Gravestock, 1978, A,B P.E. Peterson, 1969). 

By protodetritiation of the thiazolium salt (152) and of 2 tritiothiamine (153) Kemp and O Brien (432) measured a kinetic isotope effect, of 2.7 for (152). They evaluated the rate of protonation of the corresponding yiides and found that the enzyme-mediated reaction of thiamine with pyruvate is at least 10 times faster than the maximum rate possible with 152. The scale of this rate ratio establishes the presence within the enzyme of a higher concentration of thiamine ylide than can be realized in water. Thus a major role of the enzyme might be to change the relative thermodynamic stabilities of thiamine and its ylide (432). 

Source J. J. Christensen, L. D. Hansen, and R. M. Izatt, Handbook of Proton Ionization Heats and Related Thermodynamic... 

Cyanuric acid is a titrable weak acid (pffai — 6.88, pifa2 — H-40, pffas — 13.5) (10). The pH of a saturated aqueous solution of pure CA at room temperature is - 4.8. Thermodynamic properties of CA are given ia Table 1. Spectroscopic data are available (1 3). Proton nmr is of limited usefulness because of proton exchange and CA s symmetry and low solubiUty. Nuclear quadmpole resonance measurements ( " N) have been reported (12). 

The low basicity of pyrrole is a consequence of the loss of aromaticity which accompanies protonation on the ring nitrogen or on carbon 2 or carbon 3 of the ring. The thermodynamically most stable cation is the 2H-pyrrolium ion, and the p/sTa for protonation at C-2 has been recorded as -3.8 the corresponding pK values for protonation at C-3 and at nitrogen are -5.9 and ca. -10 (Scheme 7). 

From a general point of view, the tautomeric studies can be divided into 12 areas (Figure 20) depending on the migrating entity (proton or other groups, alkyl, acyl, metals. ..), the physical state of the study (solid, solution or gas phase) and the thermodynamic (equilibrium constants) or the kinetic (isomerization rates) approach. 

A parallel exists between the results of protonation and alkylation of pyrazolones since there is an alkyl derivative for each tautomer. The main difference is that the percentage of the different tautomers is thermodynamically controlled whereas that of alkyl derivatives is kinetically controlled. One has to remember that the alkyl derivatives thus obtained are the fixed compounds used in tautomeric studies. 

In theory two carbanions, (189) and (190), can be formed by deprotonation of 3,5-dimethylisoxazole with a strong base. On the basis of MINDO/2 calculations for these two carbanions, the heat of formation of (189) is calculated to be about 33 kJ moF smaller than that of (190), and the carbanion (189) is thermodynamically more stable than the carbanion (190). The calculation is supported by the deuterium exchange reaction of 3,5-dimethylisoxazole with sodium methoxide in deuterated methanol. The rate of deuterium exchange of the 5-methyl protons is about 280 times faster than that of the 3-methyl protons (AAF = 13.0 kJ moF at room temperature) and its activation energy is about 121 kJ moF These results indicate that the methyl groups of 3,5-dimethylisoxazole are much less reactive than the methyl group of 2-methylpyridine and 2-methylquinoline, whose activation energies under the same reaction conditions were reported to be 105 and 88 kJ moF respectively (79H(12)1343). 

According to a kinetic study which included (56), (56a) and some oxaziridines derived from aliphatic aldehydes, hydrolysis follows exactly first order kinetics in 4M HCIO4. Proton catalysis was observed, and there is a linear correlation with Hammett s Ho function. Since only protonated molecules are hydrolyzed, basicities of oxaziridines ranging from pii A = +0.13 to -1.81 were found from the acidity rate profile. Hydrolysis rates were 1.49X 10 min for (56) and 43.4x 10 min for (56a) (7UCS(B)778). O-Protonation is assumed to occur, followed by polar C—O bond cleavage. The question of the place of protonation is independent of the predominant IV-protonation observed spectroscopically under equilibrium conditions all protonated species are thermodynamically equivalent. 

THERMODYNAMIC STUDIES ON THE PROTONATION EQUILIBRIA OF SOME HYDROXAMIC ACIDS IN NaNOj SOLUTIONS IN WATER AND IN MIXTURES OF WATER AND DIOXANE... 

The protonation equilibria for nine hydroxamic acids in solutions have been studied pH-potentiometrically via a modified Irving and Rossotti technique. The dissociation constants (p/fa values) of hydroxamic acids and the thermodynamic functions (AG°, AH°, AS°, and 5) for the successive and overall protonation processes of hydroxamic acids have been derived at different temperatures in water and in three different mixtures of water and dioxane (the mole fractions of dioxane were 0.083, 0.174, and 0.33). Titrations were also carried out in water ionic strengths of (0.15, 0.20, and 0.25) mol dm NaNOg, and the resulting dissociation constants are reported. A detailed thermodynamic analysis of the effects of organic solvent (dioxane), temperature, and ionic strength on the protonation processes of hydroxamic acids is presented and discussed to determine the factors which control these processes. 

The thermodynamic parameters DH, DG and TDS were calculated as a function of the degree of protonation and the amount of ClE+ bound at high ionic strength of EPEI, BPEI and PPI. The different behaviour of EPEI, BPEI and PPI is discussed. 

The results supported the proposal of Glu-165 as the general base and suggested the novel possibility of neutral histidine acting as an acid, contrary to the expectation that His-95 was protonated [26,58]. The conclusion that the catalytic His-95 is neutral has been confinned by NMR spectroscopy [60]. The selection of neutral imidazole as the general acid catalyst has been discussed in terms of achieving a pX, balance with the weakly acidic intermediate. This avoids the thermodynamic trap that would result from a too stable enediol intermediate, produced by reaction with the more acidic imidazolium [58]. 

Nitroalkanes show a related relationship between kinetic acidity and thermodynamic acidity. Additional alkyl substituents on nitromethane retard the rate of proton removal although the equilibrium is more favorable for the more highly substituted derivatives. The alkyl groups have a strong stabilizing effect on the nitronate ion, but unfavorable steric effects are dominant at the transition state for proton removal. As a result, kinetic and thermodynamic acidity show opposite responses to alkyl substitution. 

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