Split-mix methodology

The split-mixed methodology is ideal for linear stategies like the synthesis of polypeptide libraries where the economisation of reaction steps gains importance. Large libraries can be synthesised, every bead containing only one single compound. Tagging or deconvolution are usually required in order to determine the stmcture of active compounds. 

The synthesis of libraries of structurally defined compounds can potentially be achieved either by split-mix synthesis or by parallel synthesis of individual compounds. The synthesis requires a reliable methodology of oligosaccharide synthesis, where stereochemistry and regioselectivity have to be achieved unlike other library approaches. Development of synthetic methodologies that can provide access to any oligosaccharide structure is underway. 

All the spectroscopic approaches applied for structural characterization of mixtures derive from methods originally developed for screening libraries for their biological activities. They include diffusion-ordered spectroscopy [15-18], relaxation-edited spectroscopy [19], isotope-filtered affinity NMR [20] and SAR-by-NMR [21]. These applications will be discussed in the last part of this chapter. As usually most of the components show very similar molecular weight, their spectroscopic parameters, such as relaxation rates or selfdiffusion coefficients, are not very different and application of these methodologies for chemical characterization is not straightforward. An exception is diffusion-edited spectroscopy, which can be a feasible way to analyze the structure of compounds within a mixture without the need of prior separation. This was the case for the analysis of a mixture of five esters (propyl acetate, butyl acetate, ethyl butyrate, isopropyl butyrate and butyl levulinate) [18]. By the combined use of diffusion-edited NMR and 2-D NMR methods such as Total Correlation Spectroscopy (TOCSY), it was possible to elucidate the structure of the components of this mixture. This strategy was called diffusion encoded spectroscopy DECODES. Another example of combination between diffusion-edited spectroscopy and traditional 2-D NMR experiment is the DOSY-NOESY experiment [22]. The use of these experiments have proven to be useful in the identification of compounds from small split and mix synthetic pools. 

In order to extend these methods to make them feasible for the study dynamical chemical processes in biopolymers, simplifying assumptions are necessary. The most obvious choice is the use of semi-empirical techniques within the Hartree Fock, linear combination of atomic orbitals framework. These methods can achieve speedups on the order of 1000 over typical ab initio calculations using split valence basis sets within the Hartree Fock approximation. Often greater accuracy can be achieved as well because of the parameterization inherent in the semi-empirical approaches. One semi-empirical approach which has proven successful in representing many chemically interesting processes is the AMI and MNDO Hartree Fock Self-Consistent Field methods developed and paramerterized by Dewar and coworkers [46]. These methods have recently been implemented in a mixed quantum/ classical methodology for the study of chemical and biochemical processes by Field et al. [47]. 

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