Regulatory element

Calculation of Conformational Free Energies for a Model of a Bilobal Enzyme Protein kinases catalyze the transfer of phosphate from adenosine triphosphate (ATP) to protein substrates and are regulatory elements of most known pathways of signal transduction. 

The gene promoter is a nucleotide sequence in DNA near the start of a gene, consisting of regulatory elements to which transcription factors and RNA polymerase bind. This leads to activation of the gene promoter and transcription of the corresponding gene. 

Also, phosphorylation of Akt results in activation of sterol regulatory-element binding protein 1 (SREBP1), a key transcription factor involved in regulation of lipogenic enzymes. In addition, some of the effects of insulin on cell proliferation and survival may be explained by an Akt-dependent inhibition of apoptosis through phosphorylation and inactivation of proa-poptotic proteins (e.g., BAD, Caspase 9). 

Regulatory regions are transcriptional control sequences, which consist of promoters, response elements, enhancers and possibly silencers, located upstream of the start site of transcription. The overall effect on gene transcription is a sum of the contributions of these elements and the activities of proteins recruited to these sites. Promoters are located immediately upstream of the start site and initiate transcription. They often contain tissue- or cell-specific elements if the gene is not ubiquitously expressed. Enhancers are positive regulatory elements which function independently of orientation and distance from the genes they regulate. 

Izumi, R., Yamada, T., Yoshikai, S., Sasaki, H., Hattori, M., Sakaki, Y. (1992). Positive and negative regulatory elements for the expression of the Alzheimer s disease amyloid precursor-encoding gene in mouse. Gene 112, 189-195. 

Hormone response elements (for steroids, T3, retinoic acid, peptides, etc) act as—or in conjunction with— enhancers or silencers (Chapter 43). Other processes that enhance or silence gene expression—such as the response to heat shock, heavy metals (Cd and Zn +), and some toxic chemicals (eg, dioxin)—are mediated through specific regulatory elements. Tissue-specific expression of genes (eg, the albumin gene in liver, the hemoglobin gene in reticulocytes) is also mediated by specific DNA sequences. 

Reporter Genes Are Used to Define Enhancers Other Regulatory Elements... 

It is well recognized that is an important regulatory element for many cellular processes, and that the major entry pathway for Ca in many cell types is via plasma membrane Ca channels. Ca channels are functional pores in membranes. They exist in plasma membranes, transverse tubule membranes and in intracellular membranes such as the sarcoplasmic and endoplasmic reticulum. Ca channels are normally closed when opened, Ca passively flows through the chan-... 

In gene therapy, production of missing or poorly expressed protein is induced by transferring the coding sequence to the cells in plasmid DNA [223]. In principle, the sequence of any protein can be transferred to the cells for protein production. Regulatory elements of DNA, such as cell specific and inducible promotors, can be... 

Fig. 6.5(a) OR gene expression. M, maternal and P, paternal DNA strands 1 2, chromosomes from neurones with differential cis/trans regulation (M/P) of each DNA strand (from Chess et al., 1998). [ = OR gene locus = suppressed regulatory element]... 

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