Pyrazine molecular structure

However, although this equation was effective in modelling the odour thresholds of the disubstituted pyrazines, two main weaknesses have been identified (72) the first was that it was difficult to dmw physical meaning from the descriptor AA J, since it was not clear which aspects of die molecular structure determined the odour threshold. The second we ess was discovered when pyrazine itself and thirteen mono-substituted pyrazines were added to the original set. The calculated and observed odour threshold values were no longer in agreement. This result indicated diat the model was insufficient for more heterogeneous data sets. 

Reactions of Cp 2Ti(Me3SiC2SiMe3) (Cp = Cp, Cp ) with triazine afford binuclear chelate complexes. Reactions with pyrazine display varied behavior and trinuclear and tetranuclear complexes are formed. The reaction with pyrimidine gives octanuclear complexes. C-C coupling reactions are observed in these reactions. Some molecular structures of these products have been determined by X-ray diffraction (Scheme 582).1514... 

Structural parameters and interatomic distances derived from electron diffraction <77JST(42)121> and x-ray diffraction studies <76AX(B)3178> were given in CHEC-I. The molecular structure of pyrazine has been determined by combined analyses of data obtained by gas-phase electron diffraction (ED) and liquid-crystal NMR (LCNMR) <88JA2758>. The NMR spectrum gives structural information because the solute is partially oriented in the liquid-crystal solvent. The structural parameters determined from the ED, LCNMR data and in a joint analysis of both are listed in Table 2. There the C—C bonded distance is fixed since LCNMR data give no information on the absolute size of the molecule. Since pyrazine itself has no dipole moment, it should not show a microwave (pure rotation) spectrum. 

Figure 7-11. Molecular structure of ortho-phenylene/indium-bromide 48 and its coordination polymers 49, 50 by reaction with pyrazine.

Figure 15 Schematic representation of the column-layer structure of the coordination polymer 84 prepared from Cu and pyrazine-2,3-dicarboxylate (pzdc) and pyrazine (right) and the molecular structure (left).

The vibronic coupling model has been applied to a number of molecular systems, and used to evaluate the behavior of wavepackets over coupled surfaces [191]. Recent examples are the radical cation of allene [192,193], and benzene [194] (for further examples see references cited therein). It has also been used to explain the lack of structure in the S2 band of the pyrazine absoiption spectrum [109,173,174,195], and recently to study the photoisomerization of retina] [196],... 

In the case of phenazine, substitution in the hetero ring is clearly not possible without complete disruption of the aromatic character of the molecule. Like pyrazine and quinoxa-line, phenazine is very resistant towards the usual electrophilic reagents employed in aromatic substitution reactions and substituted phenazines are generally prepared by a modification of one of the synthetic routes employed in their construction from monocyclic precursors. However, a limited range of substitution reactions has been reported. Thus, phenazine has been chlorinated in acid solution with molecular chlorine to yield the 1-chloro, 1,4-dichloro, 1,4,6-trichloro and 1,4,6,9-tetrachloro derivatives, whose gross structures have been proven by independent synthesis (53G327). 

Heterocycles with a l,2,3,4-tetrahydropyrrolo[l,2-a]pyrazine core are also available through this multicomponent reaction. Compounds with a related structure are of high interest either for synthetic applications or for biological purposes. For the first time we were able to propose a one-pot access to pyrrolopiperazine and azasteroide-type scaffolds, illustrating the potential of this ecocompatible sequence to create molecular complexity and diversity from simple and readily available substrates (Scheme 60) [164]. In this case, the primary amine partner bears a pyrrole nucleophile, which neutralizes the transient iminium intermediate to form a new C-C bond via an intramolecular Pictet-Spengler-type cyclization. 

The (Z)- and ( )-styrylpyrazine structures 20j and 20k were assigned on the base of the mass, NMR, and UV spectral data. The mass spectrum of Z isomer (20j) shows a base peak (the molecular ion) at m/z 210 with a peak at m/z 133 formed by the loss of a phenyl group firom 20j. The H-NMR spectrum shows the presence of five aromatic and two olefinic protons in addition to one heteroaromatic proton and two methyl groups attached to the heteroaromatic nucleus. Ozonolysis of the Z isomer (20j) yields 3-formyl-2,5-dimethylpyrazine (487) and benzaldehyde, confirming the styryl moiety in 20j. The ( )-styryl derivative (20k) is readily isomerized to the Z isomer (20j) on exposure to sunlight (Scheme 60). Extraction of the pyrazines from I. humillis in the dark indicates that E isomer 20k is the naturally occurring product 144,145). 

In the X-ray analysis of a crystal structure the first step is the determination of the space group and the number of molecules in the unit cell. Occasionally it may be immediately apparent from such data that the molecule itself possesses certain elements of symmetry, and these may define or at least limit the possible molecular conformations. The elements most commonly found in aromatic molecules are centres of symmetry and twofold rotation axes. It might have been expected that the plane of symmetry would manifest itself in aromatic systems, but this is disappointingly rare. Indeed, amongst the structures reviewed here the only cases where a crystallographic symmetry plane coincides with that of a planar molecule occur in s-triazine and pyrazine (see Section V, A, 5). 

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