Protein synthesis transition temperature

The conversion of dinitrogen to ammonia is one of the important processes of chemistry. Whereas the technical ammonia synthesis requires high temperature and pressure (1), this reaction proceeds at room temperature and ambient pressure in nature, mediated by the enzyme nitrogenase (2). There is evidence that N2 is bound and reduced at the iron-molybdenum cofactor (FeMoco), a unique Fe/Mo/S cluster present in the MoFe protein of nitrogenase. Although detailed structural information on nitrogenase has been available for some time (3), the mechanism of N2 reduction by this enzyme is still unclear at the molecular level. Nevertheless, it is possible to bind and reduce dinitrogen at simple mono- and binuclear transition-metal systems which allow to obtain mechanistic information on elemental steps involved... 

Transition metal complexes of phthalocyanine encaged in faujasite type zeolites have been reported as efficient catalysts in the oxidation of alkanes at room temperature and atmospheric pressure [6-13]. These catalysts constitute potential inorganic mimics of remarkable enzymes such as monooxygenase cytochrome P-450 which displays the ultimate in substrate selectivity. In these enzymes the active site is the metal ion and the protein orientates the incoming substrate relative to the active metal center. Zeolites can be used as host lattices of metal complexes [14, 15]. The cavities of the aluminosilicate framework can replace the protein terciary structure of natural enzymes, thus sieving and orientating the substrate in its approach to the active site. Such catalysts are constructed by the so-called ship in a bottle synthesis the metal phthalocyanine complexes are synthesized in situ within the supercages of the zeolite... 

All organisms regulate the fluidity of their membranes to maintain a membrane bilayer in a largely fluid state. As temperatures are lowered, membranes undergo a reversible change from a fluid (disordered) to a non-fluid (ordered) state. In E. coli, the temperature of the transition point depends on the fatty acid composition of the membrane phospholipids [12]. At lower temperatures, the amount of c/i-vaccenic acid is rapidly (within 30 s) increased due to the increased activity of FabF. Synthesis of mRNA and protein are not required. Mutants that lack FabF are unable to modulate their fatty acid composition in a temperature-dependent manner. Thus FabF, and not FabB, is involved in the thermal regulation of the fatty acid composition of the membranes. 

D-amino acid residue on the right (an optical isomer that does occur in biology, but in those peptides not encoded for by the genetic code). C The effect of insertion of a D-amino acid residue in an otherwise L-amino acid residue protein in the P-spiral structure of the elastic-contractile model protein of our focus would be to disrupt the regular structure. This is difficult to avoid completely in chemical synthesis, and it increases the temperature at which occurs the inverse temperature transition and decreases the heat of the transition due to less optimal association of oil-like groupings. 

Early in our studies it was expected that the post-translational modification of proline hydroxylation, so important to proper collagen structure and function, would raise the value of the temperature, T, for the onset of the inverse temperature transition for models of elastin. Accordingly, hydroxyproline (Hyp) was incorporated by chemical synthesis into the basic repeating sequence to give the protein-based polymers poly[fvs,i(Val-Pro-Gly-Val-Gly), fHyp( al-Hyp-Gly-Val-Gly)], where f sl -i- fnyp = 1 and values of fnyp were 0, 0.01, and 0.1. The effect of prolyl hydroxylation is shown in Figure 7.49. Replacement of proline by hydroxyproline markedly raises the temperature for hydrophobic association. Prolyl hydroxylation moves the movable cusp of... 

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