Protein model for

CS Ring, E Sun, JH McKerrow, GK Lee, PI Rosenthal, ID Kuntz, EE Cohen. Structure-based inhibitor design by using protein models for the development of antiparasitic agents. Proc Natl Acad Sci USA 90 3583-3587, 1993. 

On a lattice, so-called crankshaft moves are trivial implementations of concerted rotations [77]. They have been generalized to the off-lattice case [78] for a simplified protein model. For concerted rotation algorithms that allow conformational changes in the entire stretch, a discrete space of solutions arises when the number of constraints is exactly matched to the available degrees of freedom. The much-cited work by Go and Scheraga [79] formulates the loop-closure problem as a set of algebraic equations for six unknowns reducible... 

PI Miyazawa, T., In Poly-Alpha-Amino Acids Proteins Models for Conformational Analysis, Fasman, G. D., Ed. Marcel Dekker New York, (1967) p 69. 

Proc. Natl. Acad. Sci. U.S.A. 90, 3538 (1993). Structure-Based Inhibitor Design by Using Protein Models for the Development of Antiparasitic Agents. 

Gerald D. Fasman, Poly-a-Amino Acids, Protein Models for Conformational Studies, in Biological Macromolecules, Vol. 1, Dekker, New York, 1967. 

Forsch., 4 (1965) 1 G. D. Passman (Ed.)> Poly-a-amino acids protein models for conformational studies, Biological Macromolecules, Arnold (London) and M. Dekker (N.Y.) 1 (1967). 

For those protein models for which structure amplitudes have been calculated, R values are usually in the range 0.4-0.5 even for the limited data available for these noncentrosymmetric structures.1S 18 There would appear to be no in principle reason why a protein model should not refine within the limits imposed by the extent and accuracy of the data and, in fact, efforts were made to refine myoglobin, the first protein to be solved. Considerable effort was invested and progress was made, but the work has never been fully reported. It is clear from what has been reported, however, that the effort was an extensive one but that the methods used were not sufficiently effective. 

Structure of Fe, Mo, and S prosthetic groups Equivalent or different Fe s Functional or structural role Relationship to other Fe-S proteins Model for Fe and Mo groups... 

Beychok, S. (1967). In Poly-a-amino Acids. Protein Model for Conformational Studies (G. D. Fasman, ed.), pp. 293-337. Dekker, New York. 

Fig. 8.3 The dirigent protein model for lignin formation proposed by Hatfield and Vermerris [54]...

Figure 9.43. Soybean trypsin inhibitor (STI), a protein model for loading and release studies using positively charged elastic protein-based polymers of varied hydrophobicity. (A) Loading curve for the protein-based polymer K/3F (GVGVP GVGVP...

We entertain two alternative hypotheses concerning P855. We are obviously attracted to the idea that P855 might be the hypothetical PufQ-Bchl complex predicted by the carrier protein model for PufQ function. In the absence of the... 

For a review, see "Poly-a-amino Acids, Protein Models for Conforma-... 

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