Polyketides analog production

Fig. 9.2-4 Production of aromatic polyketide analogs. Combining the R1128 loading module with act minimal PKS produces a novel biaromatic polyketide. See text for domain abbreviations,...

Tlie sequential reactions in elongating acyl transfers in the synthesis of polyketide natural products and non-ribosomal peptide antibiotics such as erythromycin, rapamycin, epotliilone, lovastatin, penicillins, cyclosporin and vancomycin resemble molecular solid-state assembly lines. Such multimodular enzymes may be utilized in combinatorial biosynthesis by way of reprogramming for the manufacture of unnaUiral analogs of natural products. 

Dalby SM, Paterson I (2010) Synthesis of polyketide natinal products and analogs as promising anticancer agents. Cinr Opin Drag Discov Devel 13 777-794... 

A stereoselective total synthesis of erythronolide A, using two Mg/z-mediated cycloadditions of nitrile oxides has been described. Of broader significance, the strategy not only facilitates the synthesis of specific polyketide targets (i.e., natural products) but also opens up new possibilities for the preparation of nonnatural analogs (482). 

The biosynthesis of polyketides is analogous to the formation of long-chain fatty acids catalyzed by the enzyme fatty acid synthase (FAS). These FASs are multi-enzyme complexes that contain numerous enzyme activities. The complexes condense coenzyme A (CoA) thioesters (usually acetyl, propionyl, or malonyl) followed by a ketoreduction, dehydration, and enoylreduction of the [3-keto moiety of the elongated carbon chain to form specific fatty acid products. These subsequent enzyme activities may or may not be present in the biosynthesis of polyketides. 

Three categories of synthetases are distinguished, based on their substrate specificity and mode of product synthesis. The two known types of polyketide synthetases (PKSs) (Type I and II) utilize acyl-coenzyme A (CoA) monomers while nonribosomal peptide synthetases (NRPSs) use amino acids and their analogs as substrates. Type I PKS and NRPS oligomerize these building blocks by a modular assembly-line arrangement while type II PKS iteratively assembles monomeric units. 

Fig.9. Polyketide products generated via in vitro biosynthesis by the fusion protein DEBS 1+TE. 1 and 2, C-labeled alternate starter unit substrates were used to synthesize the Cj- and CiQ-lactones, respectively. 3 and 4, (2S,3R)-2-methyl-3-hydroxypentanoyl-N-acetylcysteamine (NAC) thioester was used as an intermediate to synthesize the C9-lactone and the 3-oxo analog, respectively. 5, In the absence of NADPH, a pyran-2-one is generated using propionyl-CoA and C-labeled methylmalonyl CoA...

The epi-quinine urea 81b was also found by Wennemers to promote an asymmetric decarboxylation/Michael addition between thioester 143 and 124 to afford the product 144 in good yield and high enantioselectivity (up to 90% ee) (Scheme 9.49). Here, malonic acid half-thioesters serve as a thioester enolate (i.e., enolate Michael donors). This reaction mimics the polyketide synthase-catalyzed decarboxylative acylation reactions of CoA-bound malonic acid half-thiesters in the biosynthesis of fatty adds and polyketides. The authors suggested, analogously with the enzyme system, that the urea moiety is responsible for activating the deprotonated malonic add half-thioesters that, upon decarboxylation, read with the nitroolefin electrophile simultaneously activated by the protonated quinuclidine moiety (Figure 9.5) [42]. 

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