Nucleophilic amidines, attack

Polysubstituted pyrimidines were synthesized from in situ generated a,p-unsaturated imines and the corresponding amidine or guanidine derivatives in a convenient one-pot procedure. It was proposed that the described transformations proceed via the initial formation of o,P-imsaturated imine that undergo nucleophilic attack by a bidentate nucleophile (amidine or guanidine). This step is then followed by elimination of ammonia and aromatization to yield the observed polysubstituted pyrimidine. 

In the oxidative Eschenmoser sulfide contraction (Scheme 11), thioamide 59 is oxidized by benzoyl peroxide to give either a symmetrical disulfide or the O-benzoate of the thiolactam-S-oxide. In any event, the once-nucleophilic thioamide sulfur atom is now forced to adopt the role of electrophile a reactivity umpolung has, in effect, been achieved.13 The nucleophilic enamide 65 attacks the sulfur atom leading to the formation of sulfur-bridged intermediate 66. The action of a phosphine or a phosphite thiophile on the putative episulfide then gives vinylogous amidine 67. 

From A(-substituted carboxamides, the 3-unsubstituted derivatives were formed, with loss of the corresponding amine. This reaction is to be expected from the mechanism of the ring closure amidine formation and subsequent nucleophilic attack of the amidine nitrogen on the carbonyl group. 

No heterocycle containing a C=N bond is as powerful a director as the oxazolines or tetrazoles described above, but their imidazoline analogues 132 direct well if deprotonated to the amidine equivalent 133 of a secondary amide anion (Scheme 61). Pyrazoles 134 also direct lithiation, but need protecting with a bulky Af-substituent to prevent nucleophilic attack by the base (Scheme 62). ... 

In another cyclization procedure for the 1,5-benzodiazodne system, the nitriles (296) are converted to the aminodihydrodiazocines (297) (79CPB2589). Attack of nucleophiles on (297) occurs at the N-5—C-6 bond to give the 3,4,5,6-tetrahydrodiazodnes (298) with NaBH4 and the jS-aminoethylquinazolines (301) on hydrolysis. The diazocines (297) behave as typical amidines. Oxidation leads to the amidoximes (300) which on hydrolysis are converted to 2,1-benzisoxazoles (302), and reaction with diketene leads to the fused pyrimidinones (299 and l-methyl-3-one isomer) (79CPB2927). 

Presumably an amidine intermediate is involved which undergoes intramolecular cyclization by nucleophilic attack on the carbonyl function to yield the pyrimidine. 

The metal-bound RCN group is also activated on coordination towards nucleophilic attack by alcohols, thiols or amines to give stable N-bonded iminoether, iminothioether and amidine complexes respectively.332 Several cationic cyanobenzylpalladium(II) complexes have been prepared, and the reactivity of the CN group towards nucleophiles has been studied.333,334 The palladium complex (97) reacts with aromatic amines to give chelated amidino complexes (98) and the reaction has been studied kinetically.333 In this case intermediates with the nitrile group bonded side-on are considered to be involved. 

Non-cyclic amidines (120 of Scheme 44) react as ambident nucleophiles in the reactions with TNB in DMSO forming198 the two zwitterionic intermediates 121 and 122 of Scheme 44, when the nucleophilic centre is the nitrogen or the carbon atom, respectively. 121 and 122 are in equilibrium with unprotonated forms. Some 122 cr-complexes were isolated as crystalline solids. In 122, a further nucleophilic attack is carried out by the C=NH group and this forms a met a bridged compound (123) in protonated or unprotonated forms198. 

Pd(0)/phosphine complexes, or their precursors, in the presence of a suitable co-base, have also been shown to promote, in good yields (66-100%), the formation of allylic carbamates from various primary and secondary aliphatic amines, pressurized C02 and allylic chlorides, in THF, at ambient temperature [87a]. The choice of the added co-base (Base), used for generating the carbamate salt RR NC02 (BaseH)+, was found to be critical for high yields of O-allylic urethanes. The use of a guanidine (CyTMG) or amidine (DBU) base was optimal for this system (see also Section 6.3.1). ft is assumed that this chemistry passes catalytically through a mechanism similar to that illustrated in Scheme 6.19. This involves nucleophilic attack by carbamate anion on a (tt-allyl) palladium species, formed by the oxidative addition of the allylic chloride to a palladium(O) intermediate. 

Various reagents of a nucleophilic or reductive nature can attack at S-2 of 1,2,3-dithiazole ring. Treatment of arylimines 69 with NaOH in aqueous EtOH afforded thiocarbamoylamidines 70 in good to excellent yields (Equation 11) <1996T8413>. The formation of amidines 70 was explained by a nucleophilic attack of hydroxide ion at S-2 with the cleavage of S-S bond. 

The initial synthetic approach to conivaptan HCl (1) employed by the Yamanouchi discovery group26 commenced with commercially available benzazepinone 10. Acylation of 10 with p-nitrobenzoyl chloride provided benzamide 11. Subsequent hydrogenation of 11 over palladium on carbon yielded aniline 12, which was in turn condensed with biphenyl-2-carbonyl chloride to provide bis(amide) 13. Bis(amide) 13 was subsequently heated with copper(II) bromide in boiling chloroform/ethyl acetate to furnish a-bromoketone 14. It is interesting that condensation of a-bromoketone 14 with acetamidine hydrochloride in the presence of potassium carbonate in boiling acetonitrile afforded not only the desired imidazobenzazepine product (1 53% yield, 2 steps) but also the related oxazolobenzazepine 15 (7% yield, 2 steps), which presumably resulted from nucleophilic attack of the benzazepinone oxygen on the amidine moiety followed by loss of ammonia. Separation of oxazolobenzazepine byproduct 15 from imidazobenzazepine 1 by silica gel chromatography followed by treatment of the purified imidazobenzazepine free-base with hydrochloric acid then provided conivaptan HCl (1). 

There is one example in which part of the amidine system is a C—N bond in a heterocyclic ring. The enamino ketone condensation products (42) of 3-amino-l,2,4-oxadiazoles and 1,3-dicarbonyl compounds cyclize in basic medium to form 60-80% yields of imidazoles. The driving force for this reaction is provided by the well-established, general attack of a nucleophilic centre in the side-chain at N-2 of the heterocyclic ring, but it is unusual in that a carbon nucleophile (rather than an oxygen or nitrogen species) is implicated (Scheme 23). 

Amino-l,2,4-oxadiazolcs (11) arc excellent sources of amidines. When they are treated with 1,3-dicarbonyl derivatives they are converted into enaminones (12), which cyclize to imidtizolcs in the presence of bases (Scheme 2.2.5). This reaction utilizes the well-known general attack of a nucleophilic group in the side chain at N-2 of the oxadiazole ring. Yields of 2-acylamino-4-acylimidazoles usually lie between 60 and 80% [21]. The free amino derivatives are readily isolated after acid hydrolysis. 

Nucleophilic attack of ammonia or of a primary or secondary amine on an O-alkyl thiocarboxylate (2) provides a formally straightforward approach to thioamides and a number of examples have been reported (equation l). - However, some limitations should be noted. Thus, there is a tendency of esters (2) to rearrange to their 5-alkyl isomers on heating (cf. Volume 6, Chapter 2.5) and these yield amides with amines rather than thioamides. Besides, excess primary amine will lead to amidine formation, or the tetrahedral intermediate of the substitution reaction may break down to an imidate rather than a thioamide (cf. Volume 6, Chapter 2.7). These unwanted side reactions are favoured in polar, protic solvents such as ethanol. In contrast, THF has proven to be particularly useful in the synthesis of tertiary thioamides according to equation (1). For improved reactivity in the preparation of V-aryl derivatives and milder reaction conditions, it is advantageous to employ the amine in the form of its Mg salt. ... 

Reaction of 7V-(phenylsulfonyl)benzhydrazidoyl chloride, which fails to yield a 1,3-dipole, with N-substituted benzamidines is postulated to proceed via an intermediate formed by nucleophilic attack of the hydrazidoyl carbon by the more basic imino nitrogen of the amidine. Intramolecular cyclization of the intermediate yields a triazoline loss of amino or phenyl-sulfonyl moieties from the latter leads to triazoles as final reaction products (Scheme 24A) (77BCJ2969). 

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