Nitrogen response pathway

Denitrification, a dissimilatory pathway of nitrate reduction (see Section 3.3 also) into nitrogen oxides, N2O, and dinitrogen, N2, is performed by a wide variety of microorganisms in the forest ecosystems. Measurable rates of N20 production have been observed in many forest soils. The values from 2.1 to 4.0 kg/ha/yr are typical for forest soils in various places of Boreal and Sub-Boreal Forest ecosystems. All in situ studies (field monitoring) of denitrification in forest soils have shown large spatial and temporal variability in response to varying soils characteristics such as acidity, temperature, moisture, oxygen, ambient nitrate and available carbon. 

Which enzymes are responsible for producing the direct donors of nitrogen into the pathway producing urea ... 

The observed dependence of the N 2 selectivity on temperature may suggest that the reduction of stored nitrates by H2 occurs via an in-series two-step pathway. The first step is fast even at low temperatures and is responsible for the consumption of hydrogen and for the formation of ammonia. The second step is slower and implies the reduction of residual nitrates with ammonia to form nitrogen this reaction occurs to a significant extent only at higher temperatures. 

The methyl transferases (MTs) catalyze the methyl conjugation of a number of small molecules, such as drugs, hormones, and neurotransmitters, but they are also responsible for the methylation of such macromolecules as proteins, RNA, and DNA. A representative reaction of this type is shown in Figure 4.1. Most of the MTs use S-adenosyl-L-methionine (SAM) as the methyl donor, and this compound is now being used as a dietary supplement for the treatment of various conditions. Methylations typically occur at oxygen, nitrogen, or sulfur atoms on a molecule. For example, catechol-O-methyltransferase (COMT) is responsible for the biotransformation of catecholamine neurotransmitters such as dopamine and norepinephrine. A-methylation is a well established pathway for the metabolism of neurotransmitters, such as conversion of norepinephrine to epinephrine and methylation of nicotinamide and histamine. Possibly the most clinically relevant example of MT activity involves 5-methylation by the enzyme thiopurine me thy Itransf erase (TPMT). Patients who are low or lacking in TPMT (i.e., are polymorphic) are at... 

The a-oxidation pathway ofTV-nitrosodiethanolamine metabolism (Figure 2) leads to the formation of an a-hydroxynitrosamine that rapidly decomposes, producing glycol aldehyde, acetaldehyde, ethylene glycol and molecular nitrogen. The latter is assumed to arise from a reactive (2-hydroxyethyl)diazonium ion, which probably is responsible for the formation of 2-hydroxyethylated adducts in DNA (Scherer et al., 1991 Loeppky etal., 1998 Loeppky, 1999). 

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