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Molecular electron density lego assembler method

The application of the additive fuzzy electron density fragments for the building of electron densities of large molecules is called the Molecular Electron Density Lego Assembler method, or MEDLA method [5,37,66,67,70-72],... [Pg.193]

The MEDLA (molecular electron density loge assembler, or molecular electron density Lego assembler) method is a numerical technique, based on the AFDF principle, on a numerical electron density fragment databank, and on the direct assembly of numerical electron density fragments into a macromolecular electron density. [Pg.137]

The additive fuzzy electron density fragmentation scheme of Mezey is the basis of the Molecular Electron Density Lego Assembler (MEDLA) method [67,70-72], reviewed in section 4. of this report, where additional details and applications in local shape analysis are discussed. The MEDLA method was used for the generation of the first ab initio quality electron densities for macromolecules such as proteins [71,72] and other natural products such as taxol [66],... [Pg.178]

Some recent developments concerning macromolecular quantum chemistry, especially the first linear-scaling method applied successfully for the ab initio quality quantum-chemistry computation of the electron density of proteins, have underlined the importance and the applicability of quantum chemistry-based approaches to molecular similarity. These methods, the linear-scaling numerical Molecular Electron Density Lego Approach (MEDLA) method [6 9] and the more advanced and more generally applicable linear-scaling macromolecular density matrix method called Adjustable Density Matrix Assembler or ADMA method [10,11], have been employed for the calculation of ab initio quality protein electron densities and other... [Pg.345]


See other pages where Molecular electron density lego assembler method is mentioned: [Pg.595]    [Pg.619]    [Pg.68]    [Pg.595]    [Pg.619]    [Pg.68]    [Pg.140]    [Pg.204]    [Pg.69]    [Pg.33]    [Pg.1457]   


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