Modeling first electron transfer reaction centers

The theory of electron transfer in chemical and biological systems has been discussed by Marcus and many other workers 74 84). Recently, Larson 8l) has discussed the theory of electron transfer in protein and polymer-metal complex structures on the basis of a model first proposed by Marcus. In biological systems, electrons are mediated between redox centers over large distances (1.5 to 3.0 nm). Under non-adiabatic conditions, as the two energy surfaces have little interaction (Fig. 5), the electron transfer reaction does not occur. If there is weak interaction between the two surfaces, a, and a2, the system tends to split into two continuous energy surfaces, A3 and A2, with a small gap A which corresponds to the electronic coupling matrix element. Under such conditions, electron transfer from reductant to oxidant may occur, with the probability (x) given by Eq. (10),... 

Modeling the First Electron Transfer from Qa to Qb in Reaction Center Proteins from Rb, sphaeroides... 

Carloni et al.91 applied the DFT(PZ) calculations to investigate the electronic structure of various models of oxydized and reduced Cu, Zn superoxide dismutase. The first stage of the enzymatic reaction involves the electron transfer from Cu" ion to superoxide. The theoretical investigations provided a detailed description of the electronic structure of the molecules involved in the electron transfer process. The effect of charged groups, present in the active center, on the electron transfer process were analyzed and the Argl41 residue was shown to play a crucial role. 

The field of light-induced electron transfer remains in a state of rapid development in many of the areas on which this brief history has touched and in others that could not be included here. Exciting progress is being made in the delineation of the first picosecond of photosynthesis, in further characterizing photosynthetic reaction centers, in the area of artificial models. The dependence of intramolecular electron transfer upon distance, solvent, orientation is being delineated. Many of these developments are detailed in the following chapters. 

The systems of the first class afford the closest approach to a simple barrier penetration process, and perhaps they more readily respond to a theoretical analysis. It can reasonably be supposed that for these systems orbital overlap for the two ions is small, so that the frequency of the electronic transition is small, and there is no substantial binding between the two exchanging centers. A model of this kind presumably corresponds to the weak overlap cases as defined and discussed by Marcus (8 ). In attempting to calculate the rates of these reactions, besides the problem of the shape and height of the barrier for the electron transfer, electrostatic interaction of the reactants must be dealt with and the energy necessary to distort the solvent and ionic atmosphere about each ion to make the enei of the electron equal at the two sites. Different workers have emphasized different ones of these factors, and serious differences of opinion are recorded. 

Fig. 6. Photochemical cycles showing coupling of electron transfer to proton transfer, cytochrome oxidation and quinone exchange in (A) native reaction centers where two Cyt c are oxidized in the cycie, (B) reaction centers where uptake of the first proton is inhibited, and (C) reaction centers where uptake ofthe second proton is inhibited (shading indicates the quinone pool). Figure source (A) Paddock, Rongey, McPherson, Juth, Feher and Okamura (1994) Pathway of proton transfer in bacterial reaction centers role of aspartate-L21Z in proton transfers associated with reduction of quinone to dihydroquinone. Biochemistry 33 734 (B) Okamura and Feher (1992) Proton transfer in reaction centers from photosynthetic bacteria. Annu Rev Biochemistry. 61 868 (C) Feher, Paddock, Rongey and Okamura (1992) Proton transfer pathways in photosynthetic reaction centers studied by site-directed mutagenesis. In A Pullman, J Jortner and B Pullman (eds) Membrane Proteins Structures, Interactions and Models, p 485. Kluwer.

The intimate mechanisms of the molybdenum enzymes have yet to be fully elucidated. Current evidence supports the transfer of an oxygen atom between Mo(IV/VI) and substrate (189) and the regeneration of the active site by two one-electron processes, the first of which generates transient Mo(V) centers (17). In view of the reactions taking place at the Mo center (Eq. (13)) and in an overall sense (Eq. (14)), chemical modeling has naturally concentrated on ... 

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