Lactobacillus comparative genomics

Kant, R., Blom, J., Palva, A., Siezen, R.J., and de Vos, W.M. (2011) Comparative genomics of Lactobacillus Comparative analysis of 20 complete Lactobacillus genomes. Microb Biotechnol 4, 323-332. 

Canchaya, C., Claesson, M.J., Fitzgerald, G.F., et al. (2006). Diversity of the genus Lactobacillus revealed by comparative genomics of five species. Microbiology 152, 3185-3196. 

Douillard, FR, Ribbera, A., Jarvinen, H.M., et al. (2013a). Comparative genomic and functional analysis of Lactobacillus casei and Lactobacillus rhamnosus strains marketed as probiotics. Appl Environ Microbiol 79, 1923-1933. 

Kankainen, M., Paulin, L., Tynkkynen, S., et al. (2009). Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein. Proc Natl Acad Sci USA 106,17193-17198. 

Lukjancenko, O., Ussery, D.W., and Wassenaar, T.M. (2012). Comparative genomics of Bifidobacterium, Lactobacillus and related probiotic gena"a. Microb Ecol 63,651—673. 

Morita, H., Toh, H., Fukuda, S., et al. (2008). Comparative genome analysis of Lactobacillus reuteri and Lactobacillus fermentum reveal a genomic island for reuterin and cobalamin production. DNA Res 15,151-161. 

Nyquist, O.L., McLeod, A., Brede, D.A., et al. (2011). Comparative genomics of Lactobacillus sakei with emphasis on strains from meat. Mol Genet Genomics 285, 297-311. 

Barrangou, R., E. Altermann, R. Hutkins, et al. (2003) Functional and comparative genomic analyses of an operon involved in fiructooligosaccharide utilization by Lactobacillus acidophilus. Proc Natl Acad Sci USA 100, 8957-8962. 

Cai, H., Thompson, R., Budinich, M.F., et al. (2009) Genome sequence and comparative genome analysis of Lactobacillus casei insights into their niche-associated evolution. Genome Biol Evol 1, 239-257. 

Smokvina, X, Weis, M., Polka, J., et al. (2013) Lactobacillus paracasei comparative genomics towards species pangenome definition and exploitation of diversity. PLoS One 8, e68731. 

Ventura, M., Canchaya, C., Bernini, V., et al. (2006) Comparative genomics and transcriptional analysis of prophages identified in the genomes of Lactobacillus gasseri, Lactobacillus salivarius, and Lactobacillus casei. Appl Environ MicroWo/72,3130-3146. 

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