Hydrogen bonds energetics

In any catalytic process, several of these mechanisms can operate in concert, and they may be augmented by additional effects such as hydrogen bond energetics (7-9), turmeling (10), and bonding of substrates to transition metal centers. In many cases, the mechanisms are interdependent, and the line of demarcation between one and another is not obvious. 

Hydrogen-Bond Energetic Definition The hydrogen bond is intact if the energy V is less than a threshold value HB> otherwise the bond is broken. TTie probability p V) that the interaction energy between two water molecules is F, as obtained from computer simulation, is shown at various temperatures in Fig. 1. The hydrogen bond is related to the presence of a maximum in the attractive part of the interaction. 

Spackman, M. A. (1999) Hydrogen bond energetics from topological analysis of experimental electron densities recognizing the importance of the promolecule, Chem. Phys. Lett. 301, 425-429. 

Variations on the a helix in which the chain is either more loosely or more tightly coiled, with hydrogen bonds to residues n + 5 or n + 3 instead of n + 4 are called the n helix and 3io helix, respectively. The 3io helix has 3 residues per turn and contains 10 atoms between the hydrogen bond donor and acceptor, hence its name. Both the n helix and the 3to helix occur rarely and usually only at the ends of a helices or as single-turn helices. They are not energetically favorable, since the backbone atoms are too tightly packed in the 3io helix and so loosely packed in the n helix that there is a hole through the middle. Only in the a helix are the backbone atoms properly packed to provide a stable structure. 

Hydrophilic hydration signifies that a strong energetically favored direct interaction exists between dissolved polar or ionic particle and the surrounding water molecules by ion-dipole-, dipole-dipole-interactions and/or hydrogen bonds. 

Diheterolevulosans, 209-211, 240 Dihexulose dianhydrides, 207 -266, see also Caramels Di-D-fructose dianhydrides 13C NMR spectra, 245-246 conformation, electronic control, 224-228 conformational rigidity, energetic outcomes, 228 hexulopyranose rings, 226 historical overview, 210-213 H NMR spectra, 248 -249 intramolecular hydrogen-bonds, 227 isomerization, 231 -232 1,2-linked, ero-anomeric effect, 224-225 listing, 240-241 nomenclature, 208-210 optical rotations and melting points, 242-243 protonic activation... 

The stability of liquid water is due in large part to the ability of water molecules to form hydrogen bonds with one another. Such bonds tend to stabilize the molecules in a pattern where the hydrogens of one water molecule are adjacent to oxygens of other water molecules. When chemical species dissolve, they must insert themselves into this matrix, and in the process break some of the bonds that exist between the water molecules. If a substance can form strong bonds with water, its dissolution will be thermodynamically favored, i.e., it will be highly soluble. Similarly, dissolution of a molecule that breaks water-to-water bonds and replaces these with weaker water-to-solute bonds will be energetically im-favorable, i.e., it will be relatively insoluble. These principles are presented schematically in Fig. 15-1. 

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