Heme proteins, enzymes

In a vertebrate organism, the heme of circulating hemoglobin represents some 70-80% of the total body heme about 10% of the heme is estimated to be present in muscle hemoglobin (myoglobin), and less than 1 % is present in heme protein enzymes. In addition to these sources of heme, recent evidence on labeled stercobilin suggests that 10-20% more heme is present in a form that is being synthesized and rapidly broken down. 

The reduction of ground state O2 with organic substances is fairly slow in aqueous or nonaqueous solutions [57] in spite of the high redox potential of O2. The O2 is utilized effectively, however, as the terminal oxidant in the respiratory chain in a biomembrane with redox enzymes composed of membrane proteins such as heme proteins containing cytochrome c oxidase [58-60] or quinol oxidase [61,62]. 

The active-site model (and the ONIOM model system) includes Fe, one aspartate and two histidine ligands, a water ligand and selected parts of the substrate (see Figure 2-6). The 2-histidine-1-carboxylate ligand theme is shared by several other non-heme iron enzymes [59], For the protein system, we used two different... 

In the field of enzyme catalysis, heme-proteins such as cytochrome P450, for example, exhibit both types of 0-0 bond cleavages in organic hydroperoxides and peroxy acids (178). Heterolytic cleavage of HOOH/ROOH yields H20 or the corresponding alcohol, ROH and a ferryl-oxo intermediate (Scheme 4). Homolytic 0-0 bond cleavage results in the formation of a hydroxyl (HO ) or an alkoxyl (RO ) radical and an iron-bound hydroxyl radical. 

In a very broad overview of the structural categories one can state several statistical correlations with type of function. Hemes are almost always bound by helices, but never in parallel a//3 structures. Relatively complex enzymatic functions, especially those involving allosteric control, are occasionally antiparallel /3 but most often parallel a//3. Binding and receptor proteins are most often antiparallel /3, while the proteins that bind in those receptor sites (i.e., hormones, toxins, and enzyme inhibitors) are most apt to be small disulfide-rich structures. However, there are exceptions to all of the above generalizations (such as cytochrome cs as a nonhelical heme protein or citrate synthase as a helical enzyme), and when one focuses on the really significant level of detail within the active site then the correlation with overall tertiary structure disappears altogether. For almost all of the dozen identifiable groups of functionally similar proteins that are represented by at least two known protein structures, there are at least... 

The cases of myoglobin and hemoglobin are not rare. Many enzymes are dependent for their function on the presence of a nonprotein group. For example, cytochrome c also contains a prosthetic group similar, but not identical, to heme, as do a number of other proteins. These are known generically as heme proteins. There is a family of enzymes that contain a flavin group, the flavoproteins. Another family contains pyridoxal phosphate, a derivative of vitamin Be. There are a number of other examples. 

Myoglobin in many respects is the prototypical example of the larger family of heme containing proteins and enzymes that vary in function from the relatively simple process of reversible binding of an electron to the activation of dioxygen for substrate hydroxylation. The relationship between members of this family of proteins is not based simply on structural similarities but on similarities in chemical reactivity as well. As the structure of myoglobin is relatively simple compared to other heme proteins and as it was the first for which the three-dimensional... 

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