Helical synthesis

Metal coordination is the main building factor used in helicate synthesis. Few examples utilizing hydrogen bonding with purpose in mind include among others... 

Cantuel, M., Gumy, R, Biinzli, J.-C.G, and Kguet, C. (2006) Encapsulation of labile trivalent lanthanides into a homobimetallic chromium(III)-containing triple-stranded helicate. Synthesis, characterization, and divergent intramolecular energy transfers. Dalton Transactions, 2647. 

In biological systems molecular assemblies connected by non-covalent interactions are as common as biopolymers. Examples arc protein and DNA helices, enzyme-substrate and multienzyme complexes, bilayer lipid membranes (BLMs), and aggregates of biopolymers forming various aqueous gels, e.g, the eye lens. About 50% of the organic substances in humans are accounted for by the membrane structures of cells, which constitute the medium for the vast majority of biochemical reactions. Evidently organic synthesis should also develop tools to mimic the Structure and propertiesof biopolymer, biomembrane, and gel structures in aqueous media. 

A related method is the component synthesis method [17], which uses a so-called static condition to model the interactions between parts of a molecule whose corresponding diagonal blocks in the Hessian are first diagonalized. It has been combined with a residue clustering algorithm that provides a hierarchy of parts, which at the lowest level provides small enough matrices for efficient diagonalization [18]. It has been applied to double-helical DNA [17] and the protein crambin [18]. 

Cyclopentadiene, b.p. 40°, is obtained by heating commercial 85% dicyclopentadiene (e.g., from Matheson, Coleman and Bell Company, Norwood, Ohio) under a short column (M in. diameter X 8-12 in. length) filled with glass helices. The distilled cyclopentadiene is collected in a receiver which is maintained at Dry Ice temperature until the cyclopentadiene is used. Methylcyclopentadiene and other substituted cyclopentadienes such as indene may also be employed for the synthesis of the correspondingly substituted ferrocenes. In these cases, the reaction of the hydrocarbon with sodium is much slower than with cyclopentadiene, and refluxing for several hours is required to complete the reaction. 

The catalytic method provides the basis for synthesis of carbon tubules of a large variety of forms. Straight tubules, as well as bent and helically wound tubules, were observed. The latter regular helices of fullerene diameter can be of special interest from both theoretical and practical points of view. 

Since the initial discovery[1,2] and subsequent development of large-scale synthesis of buckytubes[3], various methods for their synthesis, characterization, and potential applications have been pursued[4-12). Parallel to these experimental efforts, theoreticians have predicted that buckytubes may exhibit a variation in their electronic structure ranging from metallic to semiconducting, depending on the diameter of the tubes and the degree of helical arrangement[13-16]. Thus, careful characterization of buckytubes and their derivatives is essential for understanding the electronic properties of buckytubes. 

Very recently, it has been reported that SWCNT can be synthesized by decomposition of benzene with Fe catalyst [27]. It would be of most importance to establish the controllability of the diameter and the helical pitch in this kind of synthesis of SWCNT toward the development of novel kinds of electronic devices such as single molecule transistor [41]. It can be said that this field is full of dream. 

Preparation methods for PCNTs have been reviewed in the context of parameters which may lead to large-scale MWCNT synthesis free of by-products. It is noteworthy that the formation of aligned CNTs is currently an active area of research in conjunction with PCNT preparation. The use of SWCNTs and/or MWCNTs in electronic devices are being developed. As yet it has not proved possible to produce CNTs with diameters and helicities to order. The formation of SWCNTs by the PCNT process has not yet been reported and it is of interest to examine whether this process can be used to prepare them. 

Synthesis and application in molecular biology of double-helical nucleic acids with covalent-bonded chains 98UK274. 

Burkoth, T. S., Beausoleil, E., Kaur, S., Tang, D., Cohen, F. E., and Zuckermann, R.N. Toward the synthesis of artificial proteins The discovery of an amphiphilic helical peptoid assembly. Chem. Biol. 2002, 9, 647-654. 

FIG. 14 Construction of periodic framework and geometric objects from DNA. (a) Construction of two-dimensional DNA lattices from tetravalent four-arm DNA junctions (14) [8]. (b) Synthesis of a macrocyclic molecule from bivalent three-arm DNA junctions (13a) containing two cohesive ends [83]. For simplification, linear double-helical stretches are represented by parallel lines. 

Kondo, Y. and Takayanagi, K. (2000) Synthesis and Characterization of Helical Multi-Shell Gold Nanowires. Science, 289, 606-608. 

The head-to-tail-coupling reactions described above are potentially useful in the design of dynamic combinatorial libraries. Features of these reactions include the rapid and reversible formation of carbon-carbon bonds, multifunctional ene-imine building blocks, and formation of stereo centers upon ene-imine linkage. Support for template-directed synthesis utilizing ene-imine building blocks is the formation of a poly ene-imine species that could recognize 3 -GGA-5 sequences of DNA.48 It is noteworthy that some polyene-imines are helical and could form a triple helix with DNA. 

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