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Genome analysis orthology

Comparative Genomics-Based Orthologous Promoter Analysis Using the DoOP Database and the DoOPSearch Web Tool... [Pg.319]

There are several promoter databases available for searching and retrieving promoter sequences. Link collections in the internet such as the http //apollol 1.isto.unibo.il/Databases.htm, http //databases.biomedcentral. com/, or the NAR database collection, http //www.oxfordjournals.org/nar/ database/c list those databases. Many of these databases, however, are not designed for comparative genomic analysis or contain only promoter sequences from a limited number of species. In this respect, the most comprehensive orthologous promoter collection is the DoOP database (4). [Pg.320]

Clusters of Orthologous Groups analysis of complete genomes... [Pg.499]

In Genome VISTA, a single sequence (draft or finished) is compared with whole genome assemblies. For a submitted sequence, the server finds candidate orthologous regions on the base genome, and provides detailed comparative analysis. [Pg.13]

Jareborg, N., Birney, E., and Durbin, R. (1999) Comparative analysis of noncoding regions of 77 orthologous mouse and human gene pairs. Genome Res. 9, 815-824. [Pg.436]

Fulton, T. M., R. Van der Hoeven, N. T. Eannetta, and S. D. Tanksley. 2002. Identification, analysis, and utilization of conserved ortholog set markers for comparative genomics in higher plants. Plant Cell 14 1457-67. [Pg.322]

See other pages where Genome analysis orthology is mentioned: [Pg.319]    [Pg.319]    [Pg.15]    [Pg.346]    [Pg.358]    [Pg.29]    [Pg.529]    [Pg.89]    [Pg.360]    [Pg.529]    [Pg.59]    [Pg.217]    [Pg.361]    [Pg.398]    [Pg.361]    [Pg.523]    [Pg.538]    [Pg.32]    [Pg.354]    [Pg.240]    [Pg.8]    [Pg.19]    [Pg.28]    [Pg.230]    [Pg.231]    [Pg.1815]    [Pg.42]    [Pg.76]    [Pg.20]    [Pg.4]    [Pg.17]    [Pg.20]    [Pg.52]    [Pg.78]    [Pg.306]    [Pg.437]    [Pg.438]    [Pg.441]    [Pg.445]    [Pg.456]    [Pg.61]    [Pg.316]    [Pg.252]    [Pg.123]    [Pg.423]   
See also in sourсe #XX -- [ Pg.347 , Pg.348 , Pg.349 ]



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