Gene structure prediction

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More recently, many integrated programs for gene structure prediction and gene identification have been developed. Several of them, including GRAIL (Uberbacher et... 

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FGENES-M Pattern-based human multiple variants of gene-structure prediction... 

Brendel, V., L. Xing, and W. Zhu. 2004. Gene structure prediction from consensus spliced alignment of multiple ESTs matching the same genomic locus. Bioinformatics 20 1157-69. 

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Figure 10.8. Gene identification by Procrustes. The nucleotide sequence encoding human lysozyme is used as a query sequence to identify its gene structure against known protein sequence (i.e., pig lysozyme protein). The output includes sequence aignment of the source (predicted translate) versus target protein (pig lysozyme).

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