Deprotection allyl esters

Silyl-derived linker 36 was prepared in three steps from a silyl ether of serine and incorporated for Fmoc/tBu-based assembly of protected gly-copeptide blocks (Scheme 11) [42]. The a-carboxylic acid function of serine was protected as an allyl ester. Deprotection by a Pd(0) catalyst in the presence of dimedone liberated the carboxylic acid in order for subsequent... 

Synthesis of isomeric chiral protected (63 )-6-amino-hexahydro-2,7-dioxopyrazolo[l,2- ]pyrazole-l-carboxylic acid 280 is shown in Scheme 36. Crude vinyl phosphonate 275, obtained by treatment of diethyl allyloxycarbonylmethyl-phosphonate with acetic anhydride and tetramethyl diaminomethane as a formaldehyde equivalent, was used in the Michael addition to chiral 4-(f-butoxycarbonylamino)pyrazolidin-3-one 272. The Michael addition is run in dichloro-methane followed by addition of f-butyl oxalyl chloride and 2 equiv of Huning s base in the same pot to provide 276 in 58% yield. The allyl ester is deprotected using palladium catalysis to give the corresponding acid 277, which is... 

The Baran group has reported an unusual deprotection of allyl esters in micro-wave-superheated water. A diallyl ester structurally related to the sceptrin natural products (see Scheme 6.87) was cleanly deprotected at 200 °C within 5 min (Scheme 6.168) [181]. Other standard deprotection transformations carried out under microwave conditions, specifically N-detosylations [317], trimethylsilyl (TMS) removal [318, 319], and N-tert-butoxycarbonyl (Boc) deprotection [231], are summarized in Scheme 6.169. 

The reaction of tert-butyl esters with Et3SiH/TFA results in the reductive deprotection of the ester and formation of isobutane. The yields of the isobutane are not recorded, but the acids are obtained nearly quantitatively (Eq. 150).307 In a similar manner, the lactone shown in Eq. 151 is converted into the acid in good yield.308 In like manner, the reductive deprotection of allyl esters provides the carboxylic acids in high yields.270... 

In an analogous fashion to the reductive deprotection of allyl alcohols and allyl esters, the deallylation of allylamines is also possible (Eq. 337).270... 

The Pd(0)-catalyzed displacement of allylic acetates (297) with various nucleophiles via the allylic Pd(II) complex (298) is a well-established procedure (Scheme 114). Through attack of electrons (+2e ) in place of nucleophiles, (298) is expected to undergo a reductive cleavage providing allylic carbanions (299) and the acetate anion along with Pd(0) complexes. The latter can then be captured by various electrophiles (polarity inversion. Scheme 114) leading to (300) [434]. This procedure is useful for the deprotection of allyl esters under neutral conditions. Recently, a mechanistic study of the Pd-catalyzed reaction of allylic acetate (297), using carbonyl compounds as an electrophile, has been reported [435]. 

C-terminal deprotection was performed using morpholine as an allyl trap, resulting in high yields. The most significant advantage of the allyl group in this peptide synthesis in comparison with the choline ester is that it overcomes the solubility problem encountered in the enzymatic deprotection approach. The deprotection of the allyl ester is performed in organic solvents, in which these lipidated peptide are readily soluble. ... 

Cleavage of the phosphonate allyl esters from Abu[PO(OAl)2]-peptide-resins is accomplished by treatment with Pd(PPh3)4 (50 °C, 5 h)[103l followed by acidolytic deprotection of the Abu[PO(OH)2]-peptide from the resin support. The viability of employing allyl phosphonate protection for phosphopeptide synthesis has been demonstrated by the Fmoc solid-phase synthesis (DIC/HOBt couplings) of several 6-9-mer Abu[PO(OH)2]-containing peptides and has been extended to the synthesis of a 19-mer caldneurin-related Abu[PO(OH)2]-peptide.[104 ... 

Another method for deallylation of allyl esters is the transfer of the allyl group to reactive nucleophiles. Amines such as morpholine are used[415-417], Potassium salts of higher carboxylic acids are used as an accepter of the allyl group[418]. The method is applied to the protection and deprotection of the acid function in rather unstable /3-lactam 664[419,420]. 

Alkylation and deprotection of N-protected aminomethylphosphonate esters 6 are shown in Scheme 6. The nitrogen is protected as the imine derived from benzophenone or a benz-aldehyde, and a variety of conditions are used for deprotonation and alkylation (Table 2). The benzaldehyde imine of aminomethylphosphonate can be deprotonated with LDA and alkylated with electrophilic halides (entries 1 and 2). For the best yields, saturated alkyl bromides require an equivalent of HMPA as an additive. 36 Allylic esters can be added to the carbanion with palladium catalysis (entries 3-7). 37,38 For large-scale production, phase-transfer catalysis appears to be effective and inexpensive (entries 8-12). 39,40 ... 

Most of these procedures are incompatible with common linkers, and are therefore unsuitable for the transformation of support-bound substrates into carboxylic acids. A more versatile approach for this purpose is the saponification of carboxylic esters. Saponifications with KOH or NaOH usually proceed smoothly on hydrophilic supports, such as Tentagel [19] or polyacrylamides, but not on cross-linked polystyrene. Esters linked to hydrophobic supports are more conveniently saponified with LiOH [45] or KOSiMe3 in THF or dioxane (Table 13.11). Alternatively, palladium(O)-mediated saponification of allyl esters [94] can be used to prepare acids on cross-linked polystyrene (Entries 9 and 10, Table 13.11). Fmoc-protected amines are not deprotected under these conditions [160],... 

Lambert and co-workers50 also synthesized a pair of cyclic octapeptides 82 and 83 and studied their propensity to form nanotubular aggregates (Fig. 5). A linear peptide was initially synthesized on SynPhase Crowns with a Rink amide handle by standard Fmoc chemistry. The first residue used was aspartic acid protected as the ct-allyl ester. The support-bound linear peptide was cyclized in a head-to-tail manner by deprotection of... 

The electroreduction procedure can also be used effectively for the deprotection of allyl esters. Palladium(0)catalyzed electroreductive cleavage of allylic esters has been performed in an MeCN—Et4NOTs—(Pt/Pb) system in the presence of Pd(0)—... 

The reactions of arylation of heterocyclic /3-ketoesters were employed in the synthesis of a number of isoflavanones and isoflavones.27,28 cr-Methylene cr-arylketones can be easily and selectively obtained by arylation of allyl /3-ketoesters which are eventually deprotected by the Tsuji s procedures. a Deallyloxycarbonylation was performed by treatment of the allyl cr-aryl-/3-ketoesters with catalytic amounts of palladium(n) acetate, triethylammo-nium formate and triphenylphosphane in THF at room temperature and afforded the a-arylketones in 75-97% yield.27 Deallyloxycarbonylation-dehydrogenation can be realized with the same allyl esters by treatment with catalytic amounts of palladium(n) acetate and l,2-bis(diphenylphosphino)ethane (DPPE) in acetonitrile under reflux and affords the ct-aryl cr,/3-unsaturated ketones in 60-90% yield (Scheme 4).28 In particular, this reaction was used in a direct convergent synthesis of 2 -hydroxyisoflavones involving arylation of an appropriate allyl /3-ketoester with the MOM-protected (2-methoxymethoxyphenyl)lead triacetate derivative (Scheme 4). The reaction of the isomeric... 

The full impact of Pd-catalysed deprotection of ally esters was first appreciated by Jeffrey and McCombie149 who showed that an allyl ester could be deprotected to the potassium salt of the corresponding carboxylic acid under Pd catalysis — a transformation that is particularly valuable for acid-sensitive substrates.130 In the example shown in [Scheme 6.57], the displacement of the exchange equilibrium over to the desired product was assured by employing the sodium salt of 2-ethyI-hexanoate. which is soluble in most common solvents except hydrocarbons.151... 

Allyl alk-2-ynoates can be readily converted into alk-2-ynoic acids by reaction with morpholine as the nucleophilic scavenger and Pd2(dba>3 as catalyst together with l, 3-diphenylphosphtnopropane as associated ligand, thereby enabling deprotection of allyl esters of 2,2,3,3-tetradehydro-PGE derivatives [Scheme 6.64]. 

Genet and co-workers devised a water soluble Pd(0) catalyst, [prepared in situ from palladium(II) acetate and trisodium 3,3, 3 -phosphinetriyltribenzenesulfo-nate (TPPTS)] that can be used to deprotect base sensitive penem allyl ester... 

---