Complexation receptor-ligand

Ligand structures were extracted from the X-ray pose of the complex receptor-ligands and were minimized into YASARA by using AMBER03 force field. 

Nonbenzodiazepine Benzodiazepine Receptor Ligands. The simultaneous discovery of the molecular target for the BZs, the GABA /BZ receptor complex, by two teams of workers (34,35) resulted ia the identification of a number of atypical or anxioselective anxiolytics that, whereas not having the BZ pharmacophore, interacted direcdy with the central BZ receptor. The anxioselective nature of such agents was considered to be... 

While the extended ternary complex model accounts for the presence of constitutive receptor activity in the absence of ligands, it is thermodynamically incomplete from the standpoint of the interaction of receptor and G-protein species. Specifically, it must be possible from a thermodynamic point of view for the inactive state receptor (ligand bound and unbound) to interact with G-proteins. The cubic ternary complex model accommodates this possibility [23-25]. From a practical point of view, it allows for the potential of receptors (whether unbound or bound by inverse agonists) to sequester G-proteins into a nonsignaling state. 

While high-affinity binding due to ternary complex formation (ligand binding to the receptor followed by... 

Dysfunction of the GABAa receptor complex such that the effects of all benzodiazepine receptor ligands are shifted in the direction of inverse agonism. In this case, fiumazenil (which normally has zero efficacy) should induce anxiety in anxious patients but have no effects in healthy subjects because they have normal receptors. 

The abundance of crystallographic information on the 3D structure of protein kinases, including knowledge of receptor-ligand complexes, has seen protein kinases feature consistently in datasets employed to both develop and evaluate methods for receptor-based screening. Indeed, the vast majority of literature surrounding protein kinases and receptor-based in silico... 

Molecular modelling of opioid receptor-ligand complexes, 40 (2002) 107 Molecularly imprinted polymers,... 

Several problems limit the interpretation of sTNF-R and IL-lra levels, including the specificity of currently available assays for free receptor or receptor-ligand complexes (El3). In addition, acute or chronic organ dysfunction may significantly alter the clearance of both sTNF-R and IL-lra, and the potential impact of established immunological dysfunction upon their production has not been clarified. 

The crystal structures of monomeric ligands such as GH and EPO in complex with their respective receptors show that these hormones are bivalent and one ligand binds simultaneously to two receptor molecules to form a 1 2 (ligand receptor) complex. Receptor dimerization is further stabilized by additional receptor-receptor interactions. 

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