Collision cells

As with most methods for studying ion-molecule kinetics and dynamics, numerous variations exist. For low-energy processes, the collision cell can be replaced with a molecular beam perpendicular to the ion beam [106]. This greatly reduces the thennal energy spread of the reactant neutral. Another approach for low energies is to use a merged beam [103]. In this system the supersonic expansion is aimed at the tluoat of the octopole, and the ions are passed tluough... 

Figure Bl.7.4. Schematic diagram of a reverse geometry (BE) magnetic sector mass spectrometer ion source (1) focusing lens (2) magnetic sector (3) field-free region (4) beam resolving slits (5) electrostatic sector (6) electron multiplier detector (7). Second field-free region components collision cells (8) and beam deflection electrodes (9).

Figure Bl.7.7. Summary of the other collision based experiments possible with magnetic sector instruments (a) collision-mduced dissociation ionization (CIDI) records the CID mass spectrum of the neutral fragments accompanying imimolecular dissociation (b) charge stripping (CS) of the incident ion beam can be observed (c) charge reversal (CR) requires the ESA polarity to be opposite that of the magnet (d) neutiiralization-reionization (NR) probes the stability of transient neutrals fonned when ions are neutralized by collisions in the first collision cell. Neutrals surviving to be collisionally reionized in the second cell are recorded as recovery ions in the NR mass spectrum.

Figure C3.3.4 shows a schematic diagram of an apparatus tliat can be used to study collisions of tlie type described above [5, 9,12,16]. Donor molecules in a 3 m long collision cell (a cylindrical tube) are excited along tlie axis of tlie cell by a short-pulse excimer laser (typically 25 ns pulse widtli operating at 248 mil), and batli molecules are probed along tliis same axis by an infrared diode laser (wavelengtli in tlie mid-infrared witli continuous light-output...

The cold plasmas tend to be unstable, are sometimes difficult to maintain, and provide ion yields that are less than those of the hot plasmas. To obviate the difficulties of the interfering isobaric molecular ions from hot plasmas, it has been found highly beneficial to include a collision cell (hexapole see Chapter 22) before the mass analyzer itself. This collision cell contains a low pressure of hydrogen gas. lon/molecule collisions between the hydrogen and, for example, ArO+... 

Precursor ions are selected by Ql and passed into the collision cell (Q2 orq2 of Figure 33.5). Here, collision with an inert gas (argon or helium) causes dissociation to occur, and the resulting fragment (product) ions are detected by scanning Q3 (Figure 33.6). 

A precursor ion scan. Source ions f,. . .., f, ) are all passed successively by Q1 into the collision cell, Q2, where a selected fragment (i ) is produced and detected by Q3. Only the ions (m, f,. fj) give f, fragment ions in this example. 

Typical MS/MS configuration. Ions produced from a source (e.g., dynamic FAB) are analyzed by MS(1). Molecular ions (M or [M + H]+ or [M - H]", etc.) are selected in MS(1) and passed through a collision cell (CC), where they are activated by collision with a neutral gas. The activation causes some of the molecular ions to break up, and the resulting fragment ions provide evidence of the original molecular structure. The spectrum of fragment ions is mass analyzed in the second mass spectrometer, MS(2). 

Magnetic/electrostatic analyzer-collision cell-quadmpole... 

If no DC (static) voltage is used, the remaining all-RF field guides all ions through the quadrupole assembly. There is no separation by m/z, and the quadrupole in this mode is often used as an ion/gas collision cell. 

The ion guides are also used as gas collision cells. When ions collide with neutral gas atoms in such a cell, it is important that ion losses due to deflection or collision should be minimized. Ion guides perform this task. 

Q/TOF, used for two mass analyzers (quadrupole and time-of-flight) used in combination QQQ (or QqQ)- a triple quadrupole analyzer (if q is used, it means the central quadrupole is also a collision cell)... 

This is probably the most widely used MS-MS instrument. The hardware, as the name snggests, consists of three sets of quadrupole rods in series (Figure 3.8). The second set of rods is not used as a mass separation device but as a collision cell, where fragmentation of ions transmitted by the first set of quadrupole rods is carried out, and as a device for focussing any product ions into the third set of quadrupole rods. Both sets of rods may be controlled to allow the transmission of ions of a single mjz ratio or a range of mjz values to give the desired analytical information. 

More recently, certain MS-MS scans have been made available on the ion-trap instrument. This type of system differs from those described previously in that the MS-MS capability is associated only with the way in which the ion-trap is operated, i.e. it is software controlled, and does not require the addition of a collision cell and a further analyser. This is because ion selection, decomposition and the subsequent analysis of the product ions are all carried out in the same part of the instrument, with these processes being separated solely in time, rather than time and space as is the case for the instruments described previously. 

---