Chaotrope

Breslow supported this suggestion by demonstrating that the cycloaddition can be further accelerated by adding anti cliaotropic salts such as lithium chloride, whereas chaotropic salts such as guanidium chloride led to a retardation " "" ". On the basis of these experiments Breslow excluded all other possible explanations for the special effect of water on the Diels-Alder reaction " . 

Folded proteins can be caused to spontaneously unfold upon being exposed to chaotropic agents, such as urea or guanidine hydrochloride (Gdn), or to elevated temperature (thermal denaturation). As solution conditions are changed by addition of denaturant, the mole fraction of denatured protein increases from a minimum of zero to a maximum of 1.0 in a characteristic unfolding isotherm (Fig. 7a). From a plot such as Figure 7a one can determine the concentration of denaturant, or the temperature in the case of thermal denaturation, required to achieve half maximal unfolding, ie, where... 

Chemical lysis, or solubilization of the cell wall, is typically carried out using detergents such as Triton X-100, or the chaotropes urea, and guanidine hydrochloride. This approach does have the disadvantage that it can lead to some denaturation or degradation of the produci. While favored for laboratory cell disruption, these methods are not typically used at the larger scales. Enzymatic destruction of the cell walls is also possible, and as more economical routes to the development of appropriate enzymes are developed, this approach could find industrial application. Again, the removal of these additives is an issue. 

For precipitated protein, buffered solutions containing chaotropic reagents such as 0.1% SDS, 8 M urea, or 6 M guanidine or proteolytic enzymes such as pepsin may be used. However, an extended washing with buffer is required to remove SDS and guanidine. Unexpected elution behavior can occur if these reagents are not removed completely. 

II. INTRODUCTION OF PolyHYDROXYETHYL ASPARTAMIDE AND THE EFFECT OF CHAOTROPES ON THE FRACTIONATION RANGE... 

Shifts in the SEC fractionation range are not new. It has been known for decades that adding chaotropes to mobile phases causes proteins to elute as if they were much larger molecules. Sodium dodecyl sulfate (SDS) (9) and guanidinium hydrochloride (Gd.HCl) (9-12) have been used for this purpose. It has not been clearly determined in every case if these shifts reflect effects of the chaotropes on the solutes or on the stationary phase. Proteins are denatured by chaotropes the loss of tertiary structure increases their hydrodynamic radius. However, a similar shift in elution times has been observed with SEC of peptides in 0.1% trifluoroacetic acid (TEA) (13-15) or 0.1 M formic acid (16), even if they were too small to have significant tertiary structure. Speculation as to the cause involved solvation effects that decreased the effective pore size of the... 

Controlling for these forces requires variation in the amount of salt, organic solvent, and the pFI of the mobile phase. It is impractical to perform such experiments with 50 mM formic acid an alternative additive must be used that maintains its chaotropic properties independent of salt content or pFI. Fortunately, mobile phases containing 50 mM hexafluoro-2-propanol (HFIP) afford a fractionation range comparable to that of the formic acid (Fig. 8.6), permitting the effects of these variables to be studied systematically. 

Walgers, R., Le, T, and Cammers-Good-win, a. An indirect chaotropic mechanism for the stabilization of helix conformation of a peptide in aqueous trifluo-roethanol and hexafluoro-2-propanol. /. Am. Chem. Soc. 1998, 720, 5073-5079. 

Oku, N., and MacDonald, R. C. (1983b). Formation of giant liposomes from lipids in chaotropic ion solutions, Biochim. Biophys. Acta. 734. 54-61. 

Zwitterionic character is notable in several therapeutic area series, e.g. in angiotensin-converhng enzyme inhibitors, quinolone anhbacterials and thrombin inhibitors. The aqueous solubiUty measurement of zwitterions is very pH dependent as might be expected. The relationship of aqueous solubiUty to ionization state is extraordinarily complex if the zwitterion is of the type capable of an equi-Ubrium between true zwitterion and formally neutral forms (e.g. as in a quinolone antibacterial). For these types of complex equilibria, salt effects on solubility may be unexpectedly large, e.g. solubility unexpectedly may track with the chaotropic character of the salt... 

Damodaran, S. (1989). Influence of protein conformation on its adaptability under chaotropic conditions. Int. ]. Biol. Macromol. 11, 2-8. 

Ion exchange chromatography is another means to remove detergents and chaotropes from protein samples. This is one rarely mentioned, but well understood benefit of using ion exchange chromatography as a first dimension separation step in a two-dimensional LC experiment. 

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