BIOSYM Technologies, Inc

DISCOVER, a molecular modeling program by Biosym Technologies, Inc., 10065 Barnes Canyon Road, San Diego, CA 92121. 

The preliminary modeled structures of the synthetic inhibitors described in this review were constructed and energy minimized by the author using HyperChem (1995, Hypercube, Inc., Release 4.5). Docking of these inhibitors to the active site of Factor Xa was accomplished by the author using the x-ray coordinates of native Factor Xa [4] and INSIGHT II (Biosym Technologies, Inc.) and the approach outlined in Section 6. 

Cover Photo Professor John M. Newsam, BIOSYM Technologies, Inc. 

The author thanks Dr. J. G. Curro for supplying preprints of his work in the PRISM theory. The author is indebted to BIOSYM Technologies, Inc., Kumho Tire Company, Lord Corporation, Owens-Corning Fiberglas Corporation, and Raychem Corporation for continuing financial support. 

Biosym Technologies, Inc. Bristol-Myers Squibb Brookhaven National Laboratory Dionex Corporation Du Pont Merck Pharmaceutical Co. Finnigan MAT Fisons Instruments Hewlett-Packard Co. 

Catalysis2.0 software user manual, Biosym Technologies Inc., San Diego., 1992. 

All modeling was performed on a Silicon Graphics using the visualization software. Insight II (Version 95.0) from BIOSYM Technologies, Inc. 

Discover User Guide (1994) version 2.9.5. San Diego Biosym Technologies, Inc. 

The molecular dynamics (MD) simulations for carbon nanotubes were carried out using the Discover module of the commercial software package supplied by Biosym Technologies Inc., USA in SiliconGraphics-IRIS 4D/30 workstation. The motion of the nuclei on the potential energy surface of the system with energy E(R) is described by Newton s equation of motion as follows ... 

Fig. 1. Schematic diagram of yeast cytochrome c peroxidase C backbone generated from the X-ray coordinates il8) using Insight II (v. 2.3.0) software (BIOSYM Technologies Inc., San Diego). The heme, the distal His52, and the proximal Hisl75 are shown in bold.

Eric Eidsmoe wrote a computer program which implemented the relationships presented in this book. This computer program and many of the relationships incorporated in it were improved and their usefulness in solving practical problems was demonstrated as a result of extensive use by many researchers at Dow. Steve Mumby, Steve Harris, Fiona Case and David Klipstein (all from Biosym Technologies, Inc. now named Accelrys, Inc.) made various contributions which resulted in the successful commercialization of the software package. 

The original software package was developed by J. Bicerano and E. R. Eidsmoe at The Dow Chemical Company (1991). It was then licensed to Biosym Technologies, Inc. (currently named Accelrys, Inc., after several mergers) for global commercialization. Its first commercial version became available in 1993. 

Dmol B. Delley, J. Chem. Phys. 92 (1990) 508 B. Delley in Density Functional Methods in Chemistry, J. K. Labanowski and J. Andzelm (eds.), Springer-Verlag, New York 1991. The DMol program is distributed by Biosym Technologies, Inc. 

Taken from ABDATA, a database of ah initio calculations. Biosym Technologies, Inc., San... 

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