Bioinformatics protein-ligand interactions

The latter series now has more than 90 titles in the molecular and cellular biosciences, including recent titles on Protein Purification, Molecular Biology, DNA-Protein Interactions, Protein-Ligand Interactions, Bioinformatics, Functional Genomics, and DNA Microarrays). 

SiteBase http //www.bioinformatics.leeds.ac.uk/sb Protein-ligand interaction site... 

Jacob, L. and Vert, J. P. 2008. Protein-ligand interaction prediction An improved chemogenomics approach. Bioinformatics 24 2149-2156. 

Minai R, Matsuo Y, Onuki H et al (2008) Method for comparing the structures of protein ligand-binding sites and application for predicting protein-drug interactions. Proteins Struct Funct Bioinformatics 72 367-381... 

Burgoyne MJ, Jackson RM (2006) Predicting protein interaction sites binding hot-spots in protein-protein and protein-ligand interfaces. Bioinformatics 22 1335-1342... 

Kasahara K, Kinoshita K, Takagi T (2010) Ligand-binding site prediction of proteins based on known fragment-fragment interactions. Bioinformatics 26 1493-1499... 

Ranking ligand binding affinities with avidin a molecular dynamics-based interaction energy study. Proteins Structure, Function, and Bioinformatics, 34, 69-81. 

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