Base pairs single

Triple-base pairs single-strand helix interactions)... 

Another application of the Johnson and Gray method was to an RNA (PK5) that had been shown by NMR to contain a pseudoknot at low temperatures and a hairpin at higher temperatures. Fitting the basis spectra to the experimental CD and absorption spectra of the PK5 RNA gave base-pair, single-strand, and nearest-neighbor base-pair frequencies which agreed well with the pseudoknot structure at low temperatures... 

Base Pair Single unit of double-stranded DNA. 

In addition to conventional applications in conducting polymers and electrooptical devices, a number of recent novel applications have emerged. Switching of DNA electron transfer upon single-strand/double-strand hybridization fonns the basis for a new medical biosensor teclmology. Since the number of base pairs of length 20... 

ASON are sequences of usually 17-30 bases of single-stranded DNA that hybridize to specific genes or their mRNA products by Watson-Crick base pairing and disrupt their function. In the case of AS-ODN (antisense oligodeoxyribonucleotides) cellular RNAseH is able to bind to the DNA-RNA duplex and hydrolyze the RNA, resulting in increased transcript turnover. Modifications to the deoxy moiety at the 2 -sugar position prohibits RNAse H action. 

The chromosomes of Escherichia coli and other bacteria are single, double-stranded DNA molecules with a total length of more than 1,000 pm. Relaxed DNA exists as a helical molecule, with one full turn of the helix occurring approximately every 10.4 base pairs. This molecule must undergo several folding and compaction steps to fit into an E. coli cell which is only 1-3 pm long. Despite this enormous compaction, bacterial DNA must be accessible for the bacterial enzymes that catalize DNA replication and transcription... 

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