A dehydrogenases

The physicochemical properties of the reactants in an eiKyme-catalyzed reaction dictate the options for the assay of enzyme activity. Spectrophotometric assays exploit the abihty of a substrate or product to absorb hght. The reduced coenzymes NADH and NADPH, written as NAD(P)H, absorb hght at a wavelength of 340 run, whereas their oxidized forms NAD(P) do not (Figure 7—9). When NAD(P)+ is reduced, the absorbance at 340 run therefore increases in proportion to—and at a rate determined by—the quantity of NAD(P)H produced. Conversely, for a dehydrogenase that catalyzes the oxidation of NAD(P)H, a decrease in absorbance at 340 run will be observed. In each case, the rate of change in optical density at 340 nm will be proportionate to the quantity of enzyme present. 

Another quite general approach is to employ a coupled assay (Figure 7-10). Typically, a dehydrogenase whose substrate is the product of the enzyme of interest is added in catalytic excess. The rate of appearance or disappearance of NAD(P)H then depends on the rate of the enzyme reaction to which the dehydrogenase has been coupled. 

Treem WR et al Acute fatty liver of pregnancy and long-chain 3-hydroxyacyl-coenzyme A dehydrogenase deficiency. Hepatology 1994 19 339. 

Koenig K, JR Andreesen (1990) Xanthine dehydrogenase and 2-furoyl-coenzyme A dehydrogenase from Pseudomonasputida Ful two molybdenum-containing dehydrogenases of novel structural composition. J Bacterial 172 5999-6009. 

The anaerobe Peptococcus (Micrococcus) aerogenes had a dehydrogenase that carried out specific hydroxylation at the 6-positions of 2- and 8-hydroxypurine, and was therefore distinct from xanthine dehydrogenase from which it could be separated (Woolfolk et al. 1970). It was also able to carry out dismutation of 2-hydroxypurine to xanthine (2,6-dihydroxypurine) and hypoxanthine (6-hydroxypurine). 

Bhushan, B., Halasz, A. and Hawari, J. (2005) Biotransformation of CL-20 by a dehydrogenase enzyme from Clostridium sp. EDB2. Applied Microbiology and Biotechnology, 69, 448—455. 

R is an electron-donor substrate such as purine or xanthine and A is an electron acceptor such as 02 or NAD+. It is thought that the in vivo mammalian form of xanthine oxidase uses NAD+ as acceptor and is therefore, more appropriately named xanthine dehydrogenase. No evidence exists for a dehydrogenase form of aldehyde oxidase. The specificities of xanthine oxidase and aldehyde oxidase have been extensively catalogued (96), and the mechanism and properties of these enzymes have been reviewed (97, 98). 

A biosensor was designed where a dehydrogenase and an enlarged coenzyme are confined behind an ultrafiltration membrane. The amino acid is determined indirectly, by measuring the fluorescence of the reduced coenzyme (kex 360 nm, kfl 460 nm) produced in reaction 22, with the aid of an optical fiber. The coenzyme is regenerated with pyruvate in a subsequent step, as shown in reaction 23. This biosensor was proposed for determination of L-alanine and L-phenylalanine for monitoring of various metabolic diseases and for dietary management363. 

Mutations in the ACAD8 (http fghr.nlm.nih.gov/gene=acad8) gene cause isobutyryl-coenzyme A dehydrogenase deficiency. 

You may find the following resources about isobutyryl-coenzyme A dehydrogenase deficiency helpful. These materials are written for the general public. 

These sources were used to develop the Genetics Home Reference condition summary on isobutyryl-coenzyme A dehydrogenase deficiency. 

The official name of this gene is "acyl-Coenzyme A dehydrogenase family, member 8."... 

Isobutyryl-Coenzyme a Dehydrogenase Deficiency - Caused by Mutations in the ACAD8 Gene... 

Domain 1 Greek key helix bundle Domain 2 miscellaneous antiparallel a Dehydrogenases, see Alcohol, Glyceraldehyde phosphate, Malate, or Lactate... 

Figure 9.16 The principle of the transfer shuttle of hydrogen atoms into the mitochondrion. A dehydrogenase in the cytosol generates XH from NADH. XH is transported into the mitochondrion where a second dehydrogenase catalyses a reaction in which the XH reduces NAD to NADH. X then returns to the cytosol. The nature of XH is considered in Figures 9.17 and 9.18.

Figure 15.11 The biochemical reactions that result in the conversion of trans-retinal to ds-retinal, to continue the detection of light To continue the process, trans-retinal must be converted back to c/s-retinal. This is achieved in three reactions a dehydrogenase converts trans-retinal to trans-retinol an isomerase converts the trans-retinol to c/s-retinol and another dehydrogenase converts c/s-retinol to c/s-retinal. To ensure the process proceeds in a clockwise direction (i.e. the process does not reverse) the two dehydrogenases are separated. The trans-retinal dehydrogenase is present in the photoreceptor cell where it catalyses the conversion of trans-retinal to trans-retinol which is released into the interstitial space, from where it is taken up by an epithelial cell. Here it is isomerised to c/s-retinol and the same dehydrogenase catalyses its conversion back to c/s-retinal. This is released by the epithelial cell into the interstitial space from where it is taken up by the photoreceptor cell. This c/s-retinal then associates with the protein opsin to produce the light-sensitive rhodopsin to initiate another cycle. The division of labour between the two cells may be necessary to provide different NADH/NAD concentration ratios in the two cells. A high ratio is necessary in the photoreceptor cell to favour reduction of retinal and a low ration in the epithelial cell for the oxidation reaction (Appendix 9.7).

As described above, PEG seems to be initially oxidized by a dehydrogenase, indicating that terminal primary alcohol groups are oxidized. Several research groups obtained the acidic metabolites or carboxylated PEGs in culture filtrates of bacteria grown on PEGs. 

NADH (reduced nicotinamide adenine dinucleotide) is utilized in biological reductions to deliver hydride to an aldehyde or ketone carbonyl group (see Box 7.6). A proton from water is used to complete the process, and the product is thus an alcohol. The reaction is catalysed by an enzyme called a dehydrogenase. The reverse reaction may also be catalysed by the enzyme, namely the oxidation of an alcohol to an aldehyde or ketone. It is this reverse reaction that provides the dehydrogenase nomenclature. 

This enzymic conversion involves two enzymes, a dehydrogenase and an isomerase. The dehydrogenase component oxidizes the hydroxyl group on pregnenolone to a ketone, and requires the oxidizing agent cofactor NAD+ (see Box 11.2). The isomerase then carries out two tautomerism reactions, enolization to a dienol followed by production of the more stable conjugated ketone. 

As we move on in the Krebs cycle, the next reaction is oxidation of the CH2-CH2 gronping in snccinate to give the unsatnrated diacid fumarate. We have already looked at this type of oxidation and seen that it involves a dehydrogenase enzyme conpled... 

An isomerase [3] transfers all-trans -retinal to the ll-cis -form, in which it is available for the next cycle. A dehydrogenase [4] can also allow retinal to be supplied from vitamin A (retinol). 

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