Transcript maps

Erickson BD, FJ Mondello (1992) Nucleotide sequencing and transcriptional mapping of the genes encoding biphenyl dioxygenase, a multicomponent polychlorinated-biphenyl-degrading enzyme in Pseudomonas strain LB400. J Bacteriol 174 2903-2912. 

Cloning and characterization of the gene for hypertension and brachydactyly on the short arm of chromosome 12 Comparative physical and transcriptional mapping of human chromosome 20ql3 segment as candidate for imprinting MITOP - the mitochondria project Molecular analysis of the vertebrate genome... 

A similar concept is that of a complete transcriptional map, a record of all of the different RNA molecules being synthesized by a cell.d e These include many different mRNAs, each of which may give rise to more than one protein, as well as many RNAs with other functions. 

Human Genome Program Home Page Human Transcript Map Human Genome Project Info... 

Favaloro, J., R. Treisman and R. Kamen. Transcription maps of polyoma virus-specific RNA analysis by two-dimensional nuclease SI gel mapping. Methods Enzymol. 65 718-749, 1980. 

Wu J., Maehara T., Shimokawa T., Yamamoto S., Harada C., Takazaki Y., Ono N., Mukai Y., Koike K., Yazaki J., Fujii F., Shomura A., Ando T., Kono L, Waki K., Yamamoto K., Yano M., Matsumoto T., Sasaki T. (2002). A comprehensive rice transcript map containing 6591 expressed sequence tag sites. Plant Cell 14 525-535. 

Cheng J, Kapranov P, Drenkow J, et al. (2005). Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution. Science. 308 1149-1154. 

Structural genomics is the DNA sequence analysis and construction of high-resolution genetic, physical, and transcript maps of an organism s genes and genome. 

What STS markers have been developed for SODl What are their map positions on the Human Transcript Map (GeneMap 99) Are these positions statistically well-supported Have any SNP markers been identified within SODl ... 

TRAIL, F., MAHANTI, N., RARICK, M., MEHIGH, R., LIANG, S.H., ZHOU, R., LINZ, J.E., Physical and transcriptional map of an aflatoxin gene cluster in Aspergillus parasiticus and functional disruption of a gene involved early in the aflatoxin pathway, Appl. Environ. Microbiol., 1995, 61,2665-2673. 

Sarid R, Flore O, Bohenzky RA, Chang Y, Moore PS (1998) Transcription mapping of the Kaposi s sarcoma-associated herpesvirus (human herpesvirus 8) genome in a body cavity-based lymphoma cell line (BC-1). J Virol 72 1005-1012... 

Table 1. Probes used for transcriptional mapping with SI nuclase and for primer extension analysis...

REGULATION OF PLASTID GENE EXPRESSION DURING FRUIT RIPENING IN TOMATO. GENE AND TRANSCRIPTION MAP OF THE PLASTID CHROMOSOME. 

So far, expression experiments have been confined to a limited number of representative genes. In this note we extend those studies to most of the pt chromosome. Complete gene map of the tomato pt genome is presented, together with the transcription map (steady-state RNA levels). The role of methylation was also studied with isoschizomers that recognize methylated bases in their target sequences. No evidence was found of pt DNA methylation during chromoplast differentiation. 

FIGURE 2. Transcription map of tomato ptDNA. Transcripts are shown in the upper parts with their sizes (kb) in the ordinates. Lengths of the lines correspond to those of the probes used and the relative hybridization intensities are indicated > cp-specific cp more than cr o, similar levels in cp and... 

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