Tautomerization in base

Compare the base-catalyzed and acid-catalyzed mechanisms shown for keto-enol tautomerism. In base, the proton is removed from the a carbon, then replaced on oxygen. In acid, oxygen is protonated first, then the a carbon is deprotonated. Most proton-transfer mechanisms work this way. In base, the proton is removed from the old location, then replaced at the new location. In acid, protonation occurs at the new location, followed by deprotonation at the old location. 

Tautomerization in Acid 883 Tautomerization in Base 884 Acid-Catalyzed Halogenation at the a Carbon 893 Halogenation at the a Carbon in Base 894 The Haloform Reaction 895... 

As an over-all conclusion, it can be stated that the assumption of ring-chain tautomerism in the pseudo bases derived from the heterocyclic quaternary ammonium salts is quite unnecessary as an explanation of the formation of two (cyclic and open-chain) types of deriva-... 

Smith et al determined the activation barrier for H2OETNP by NMR in CD2CI2 at 300 MHz (ZIGI73 = 55.2 kJ mor )(94JA3261) and found it to be similar to that measured for NH tautomerism in other free-base dodeca-substituted porphyrins (90JA8851, 92JA9859, 93IC1716). Finnish authors have reported a detailed study of the tautomerism of a natural chlorin. 

The lUPAC designation is De -I- Ae. First-order kinetics are predicted and many such examples have been found. Other evidence for the SeI mechanism was obtained in a study of base-catalyzed tautomerization. In the reaction the rate of... 

Scheme 17. Importance of Tautomerism in Mispairing of Nucleic Acid Bases...

Up to now the four-orbital model-based theory of porphyrin absorption electronic spectra ( ) has not taken into account the influence of NH-tautomerism in non-symmetrical porphyrins on the positions and intensities of electronic transitions in the visible region. The theoretical consideration of this problem involves solving the fundamental question of the absolute orientation of electronic transition oscillators for each tautomer. First of all. 

The iV-unsubstituted 2-aryltetrahydro-l,3-oxazines exhibit ring-chain tautomerism in solution. Depending on the steric and electronic characters of the substituents, the ring form and the open-chain Schiff base form occur in different ratios. For a more detailed discussion, see Section IV,A,4. 

In a number of nonenzymatic reactions catalyzed by pyridoxal, a metal ion complex is formed—a combination of a multivalent metal ion such as cupric oi aluminum ion with the Schiff base formed from the combination of an amino acid and pyridoxal (I). The electrostatic effect of the metal ion, as well as the electron sink of the pyridinium ion, facilitates the removal of an a -hydrogen atom to form the tautomeric Schiff base, II. Schiff base II is capable of a number of reactions characteristic of pyridoxal systems. Since the former asymmetric center of the amino acid has lost its asymmetry, donation of a proton to that center followed by hydrolytic cleavage of the system will result in racemic amino acid. On the other hand, donation of a proton to the benzylic carbon atom followed by hydrolytic cleavage of the system will result in a transamination reaction—that is, the amino acid will be converted to a keto acid and pyridoxal will be converted to pyridoxamine. Decarboxylation of the original amino acid can occur instead of the initial loss of a proton. In either case, a pair of electrons must be absorbed by the pyridoxal system, and in each case, the electrostatic effect of the metal ion facilitates this electron movement, as well as the subsequent hydrolytic cleavage (40, 43). 

Recently, we reported observations of the femtosecond dynamics of tautomerization in model base pairs (7-azaindole dimers) containing two hydrogen bonds. Because of the femtosecond resolution of proton motions, we were able to examine the cooperativity of formation of the tautomer (in... 

Femtosecond Molecular Dynamics of Tautomerization in Model Base Pairs, A. Douhal, S. K. Kim, and A. H. Zewail, Nature 378, 260 (1995). 

J. -L. Martin Prof. Zewail, how do you expect your work on pho-toinduced tautomerization of base pairs to apply to the real world of DNA, where such a reaction would happen on ground-state potential surface in a water environment ... 

In general, the problem of tautomerism in nucleic acid bases has been approached by comparing the IR spectra of several isoelectronic model compounds. The model corresponding to the cytosine tautomers 4 or 5 have not yet been investigated. The IR spectroscopy studies cannot therefore definitely rule out these tautomers. It seems, however, that they do rule out form 6 for cytosine and cytidine and indicate that the dominant tautomer of the compounds in aqueous solution is the lactam-amino form 2, and that the protonated cations have the structure 7. 

Tautomerism and base pairing. Tautomerism has an interesting relationship to the formation of the pairs and triplets of hydrogen bonds in DNA or RNA. Each base exists predominately as one preferred... 

The EXAFS technique has been especially useful for metalloproteins. It has often provided the first clues as to the identity of atoms (O, N, S) surrounding a metal atom and either covalently bonded to it or coordinated with it (Chapter 16). Interpretations are often difficult, and a common approach is to try to simulate the observed spectrum by calculation from a proposed structure.118 Tautomerism in crystalline Schiff bases (see Eq. 23-24) has been studied by nearedge X-ray absorption fine structure (NEXAFS) employing soft X-rays.119... 

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