Sulfoxides, allylic mechanism

M. Johnston, R. Raines, C. Walsh, and R. A. Firestone (1980), Mechanism-based enzyme inactivation using an allyl sulfoxide-allyl sulfenate ester rearrangement, J. Amer. Chem. Soc. 102,4241-4250. 

In order to account for the unusually facile thermal racemization of optically active allyl p-tolyl sulfoxide (15 R = p-Tol) whose rate of racemization is orders of magnitude faster than that of alkyl aryl or diaryl sulfoxides as a result of a comparably drastically reduced AH (22kcalmol- ), Mislow and coworkers44 suggested a cyclic (intramolecular) mechanism in which the chiral sulfoxide is in mobile equilibrium with the corresponding achiral sulfenate (equation 10). 

Further examples of the utility of the allylic sulfoxide-sulfenate interconversion in the construction of various biologically active natural products include intermediates such as the /Miydroxy-a-methylene-y-butyrolactones (e.g. 63)128 and tetrahydrochromanone derivative 64129. Interestingly, the facility and efficiency of this rearrangement has also attracted attention beyond the conventional boundaries of organic chemistry. Thus, a study on mechanism-based enzyme inactivation using an allyl sulfoxide-sulfenate rearrangement has also been published130 131. 

Baechler and coworkers204, have also studied the kinetics of the thermal isomerization of allylic sulfoxides and suggested a dissociative free radical mechanism. This process, depicted in equation 58, would account for the positive activation entropy, dramatic rate acceleration upon substitution at the a-allylic position, and relative insensitivity to changes in solvent polarity. Such a homolytic dissociative recombination process is also compatible with a similar study by Kwart and Benko204b employing heavy-atom kinetic isotope effects. 

Nishimura and coworkers57-59 studied the y-radiolysis of aqueous solutions of sulfoxide amino acids. Sulfoxide amino acids are the precursors of the flavors of onions (S-propyl-L-cysteine sulfoxide, S-methyl-L-cysteine sulfoxide and S-(l-propenyl)-L-cysteine sulfoxide) and garlic (S-allyl-L-cysteine sulfoxide). In studies on sprout inhibition of onion by /-irradiation it was found that the characteristic flavor of onions became milder. In the y-radiolysis of an aqueous solution of S-propyl-L-cysteine sulfoxide (PCSO)57,58 they identified as the main products alanine, cysteic acid, dipropyl disulfide and dipropyl sulfide. In the radiolysis of S-allyl-L-cysteine sulfoxide (ACSO) they found that the main products are S-allyl-L-cysteine, cysteic acid, cystine, allyl alcohol, propyl allyl sulfide and diallyl sulfide. The mechanisms of formation of the products were partly elucidated by the study of the radiolysis in the presence of N20 and Br- as eaq - and OH radicals scavengers, respectively. 

The rearrangement of allylic sulfoxides to allylic sulfenates was first studied in connection with the mechanism of racemization of allyl aryl sulfoxides.272 Although the allyl sulfoxide structure is strongly favored at equilibrium, rearrangement through the achiral allyl sulfenate provides a low-energy pathway for racemization. 

In contrast to benzyl p-tolyl sulfoxide 37, allyl p-tolyl sulfoxide 217 racemizes between 50 and 70°C. The values of the activation energy and the entropy (A/f = 23 kcal/mol AS = -4.9 e.u.) as well as the absence of decomposition products are indicative of a different racemization mechanism for this sulfoxide. In this connection, it is interesting to note that the condensation of p-toluenesulfenyl chloride with allyl alcohol labeled in the a-position with deuterium... 

An ab initio method has been employed to study the mechanism of the thermal isomerization of buta-1,2-diene to buta-1,3-diene. The results of the study have indicated619 that the transformation proceeds in a stepwise manner via a radical intermediate. Experimental free energies of activation for the bond shift in halocyclooctatetraenes have been reported and analyzed by using ab initio MO calculations.620 The isomerization of hexene using a dihydridorhodium complex in dimethyl sulfoxide has been reported,621 and it has been suggested622 that the Pd(II)-catalysed homogeneous isomerization of hexenes proceeds by way of zr-allylic intermediates. A study has been made623 of alkene isomerization catalysed by the rhodium /-phosphine-tin dichloride dimeric complex, and the double-bond isomerization of olefinic amines over potassium amide loaded on alumina has been described.624... 

If the latter reaction proceeds through a closed transition state (e.g., 5 in Scheme 7.2), good diastereocontrol can be expected in the case of trans- and cis-CrotylSiCl3 (2b/2c) [14, 15]. Here, the anh-diastereoisomer 3b should be obtained from trans-crotyl derivative 2b, whereas the syn-isomer 3c should result from the reaction of the cis-isomer 2c (Scheme 7.2). Furthermore, this mechanism creates an opportunity for transferring the chiral information if the Lewis base employed is chiral. Provided that the Lewis base dissociates from the silicon in the intermediate 6 at a sufficient rate, it can act as a catalyst (rather than as a stoichiometric reagent). Typical Lewis bases that promote the allylation reaction are the common dipolar aprotic solvents, such as dimethylformamide (DMF) [8,12], dimethyl sulfoxide (DMSO) [8, 9], and hexamethylphosphoramide (HMPA) [9, 16], in addition to other substances that possess a strongly Lewis basic oxygen, such as various formamides [17] (in a solution or on a solid support [7, 8, 18]), urea derivatives [19], and catecholates [10] (and their chiral modifications [5c], [20]). It should be noted that, upon coordination to a Lewis base, the silicon atom becomes more Lewis acidic (vide infra), which facilitates its coordination to the carbonyl in the cyclic transition state 5. 

The product obtained is an allylic alcohol with the hydroxyl group at the other end of the allyl system from where the sulfur started—-a rearrangement has taken place. We have observed the rearrangement in this case because the P(OMe)3 has trapped the rearrangement product but, even without this reagent, allylic sulfoxides are continually and reversibly rearranging into sulfenate esters by the mechanism shown below. 

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