Stereochemical examples

Formation of odd-electron even-center bonds may also serve as a driving force in conformational transitions of organic ion-radicals. The nature of such bond has been considered in Section 3.2.3 and several specific stereochemical examples were analyzed. 

The power of proton NMR has been illustrated with stereochemical examples. The spectrum is also sensitive to other types of defects, including branches. 

This example illustrates a subtle control of a chemical reaction by a delicate manipulation of tire stereochemical environment around a metal centre dictated by tire selection of tire ligands. This example hints at tire subtlety of nature s catalysts, tire enzymes, which are also typically stereochemically selective. Chiral catalysis is important in biology and in tire manufacture of chemicals to regulate biological functions, i.e., phannaceuticals. 

The classic example is the butadiene system, which can rearrange photochemi-cally to either cyclobutene or bicyclobutane. The spin pairing diagrams are shown in Figure 13. The stereochemical properties of this reaction were discussed in Section III (see Fig. 8). A related reaction is the addition of two ethylene derivatives to form cyclobutanes. In this system, there are also three possible spin pairing options. 

A molecule editor can draw a chemical structure and save it, for example as a Molfile. Although it is possible to include stereochemical properties in the drawing as wedges and hashed bonds, or even to assign a stereocenter/stereogroup with its identifiers R/S or E/Z), the connection table of the Molfile only represents the constitution (topology) of the molecule. 

Thus, to name just a few examples, a nucleophilic aliphatic substitution such as the reaction of the bromide 3.5 with sodium iodide (Figure 3-21a) can lead to a range of stereochemical products, from a l l mbrture of 3.6 and 3.7 (racemization) to only 3.7 (inversion) depending on the groups a, b, and c that are bonded to the central carbon atom. The ring closure of the 1,3-butadiene, 3.8, to cyclobutene... 

The aim of the second example is to find suitable reaction conditions for running the same reduction reaction as in the first example, but in the presence of another carbonyl group which should not react. Furthermore, the reaction should lead to a product with a yield of 80% or more and a specific stereochemical configuration. 

Many stereoselective reactions have been most thoroughly studied with steroid examples because the rigidity of the steroid nucleus prevents conformational changes and because enormous experience with analytical procedures has been gathered with this particular class of natural products (J. Fried, 1972). The name steroids (stereos (gr.) = solid, rigid) has indeed been selected very well, if one considers stereochemical problems. We shall now briefly point to some other interesting, more steroid-specific reactions. 

When propene is polymerized under free radical conditions the polypropylene that results IS atactic Catalysts of the Ziegler-Natta type however permit the preparation of either isotactic or syndiotactic polypropylene We see here an example of how proper choice of experimental conditions can affect the stereochemical course of a chemical reaction to the extent that entirely new materials with unique properties result... 

The 8n2 mechanism is believed to describe most substitutions m which simple pri mary and secondary alkyl halides react with anionic nucleophiles All the examples cited in Table 8 1 proceed by the 8 2 mechanism (or a mechanism very much like 8 2— remember mechanisms can never be established with certainty but represent only our best present explanations of experimental observations) We 11 examine the 8 2 mecha nism particularly the structure of the transition state in more detail in 8ection 8 5 after hrst looking at some stereochemical studies carried out by Hughes and Ingold... 

Diastereotopic (Section 7 13) Descnbing two atoms or groups in a molecule that are attached to the same atom but are in stereochemically different environments that are not mirror images of each other The two protons shown in bold in H2C=CHC1 for example are diastereotopic One is cis to chlonne the other is trans... 

The stereochemical outcome of these reactions can be explained by considering the transition-state geometry. For example, applying the Houk model (495) to akyhc alcohols and their derivatives, the smallest substituent at the preexisting chiral center is oriented "inside" over the face of the transition-state ring and the oxygen atom "outside" (483). 

Several methods are being studied to enhance the stabiUty of peptide mimics and improve their stereochemical similarity to the endogenous peptides. For example, the tetrapeptide Cys—Val—Phe—Met, a potent inhibitor of Ras famesyltransferase, is proposed to exist in a turned conformation, which mimics the endogenous peptide during enzyme binding. This conformation is successhiUy mimicked by 3-amino-l-carboxymethyl-5-phenyl-benzodiazepin-2-onederivatives (198) (142). 

The observation in 1949 (4) that isobutyl vinyl ether (IBVE) can be polymerized with stereoregularity ushered in the stereochemical study of polymers, eventually leading to the development of stereoregular polypropylene. In fact, vinyl ethers were key monomers in the early polymer Hterature. Eor example, ethyl vinyl ether (EVE) was first polymerized in the presence of iodine in 1878 and the overall polymerization was systematically studied during the 1920s (5). There has been much academic interest in living cationic polymerization of vinyl ethers and in the unusual compatibiUty of poly(MVE) with polystyrene. 

The lUPAC rules and Jsfmintions for fundamuntal stereochemistry are given with examples in J. Org. Chem. 35 2849 (1970) see also G. Krow, Top. Stereochem. 5 31 (1969). 

Incorporation of stereogenic centers into cyclic structures produces special stereochemical circumstances. Except in the case of cyclopropane, the lowest-eneigy conformation of the tings is not planar. Most cyclohexane derivatives adopt a chair conformation. For example, the two conformers of cis-l,2-dimethylcyclohexane are both chiral. However, the two conformers are enantiomeric so the conformational change leads to racemization. Because the barrier to this conformational change is low (lOkcal/mol), the two enantiomers arc rapidly interconverted. 

Some stereospecific reactions are listed in Scheme 2.9. Examples of stereoselective reactions are presented in Scheme 2.10. As can be seen in Scheme 2.9, the starting materials in these stereospecific processes are stereoisomeric pairs, and the products are stereoisomeric with respect to each other. Each reaction proceeds to give a single stereoisomer without contamination by the alternative stereoisomer. The stereochemical relationships between reactants and products are determined by the reaction mechanism. Detailed discussion of the mechanisms of these reactions will be deferred until later chapters, but some comments can be made here to illustrate the concept of stereospecificity. 

The study of the stereochemical course of organic reactions often leads to detailed insight into reaction mechanisms. Mechanistic postulates ftequently make distinctive predictions about the stereochemical outcome of the reaction. Throughout the chapters dealing with specific types of reactions, consideration will be given to the stereochemistry of a reaction and its relationship to the reaction mechanism. As an example, the bromination of alkenes can be cited. A very simple mechanism for bromination is given below ... 

Stereochemical analysis can add detail to the mechanistic picture of the Sj l substitution reaction. The ionization mechanism results in foimation of a caibocation intermediate which is planar because of its hybridization. If the caibocation is sufficiently long-lived under the reaction conditions to diffirse away from the leaving group, it becomes symmetrically solvated and gives racemic product. If this condition is not met, the solvation is dissymmetric, and product with net retention or inversion of configuration may be obtained, even though an achiral caibocation is formed. The extent of inversion or retention depends upon the details of the system. Examples of this effect will be discussed in later sections of the chapter. 

Conjugated dienes can undergo a variety of photoreactions, depending on whether excitation is direct or photosensitized. The benzophenone-sensitized excitation of 1,3-pentadiene, for example, results in stereochemical isomerization and dimerization ... 

Spatial and/or coordinative bias can be introduced into a reaction substrate by coupling it to an auxiliary or controller group, which may be achiral or chiral. The use of chiral controller groups is often used to generate enantioselectively the initial stereocenters in a multistep synthetic sequence leading to a stereochemically complex molecule. Some examples of the application of controller groups to achieve stereoselectivity are shown retrosynthetically in Chart 19. 

In the early days of steroid chemistry, dehydrations were usually carried out under rather drastic conditions, frequently in the presence of strong acids (see, for example, ref. 176, 181, 182). Such conditions have been replaced by milder and more selective methods, except in those instances when either the product is stable e.g. ref. 183, 184) or rearrangement is desired. The importance of stereochemical factors in rearrangements is widely recognized for instance, the Westphalen rearrangement of 5a-alcohols (92) cf. ref. 185,... 

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