Searches Forms for

Figure 5.8. Search form for RNA modification database. To search the database, only one radio from each category can be selected, however, multiple selections from the output (show) boxes are possible. Partial name is optional, and more than one partial name can be entered if they are separated by a space.

National Cancer Institute. URL http //www.cancer.gov/clini-caltrials (accessed October 2005). The U.S. National Cancer Institute s PDQ database of cancer clinical trials. Uses search forms for guiding search with drop-down boxes listing all types of cancer. Can also select type and location of trial. Advanced search form allows limiting by cancer stage or sub-type, type of treatment or intervention (drop-down box lists options), drug/s used in the trial, and active or closed trials. The treatment/intervention choices allow you to select... 

In the worst case, the backtracking algorithm will form a search tree of depth n, where n is the number of atoms in the query graph. Also, in this case a separate sub-tree search process for each atom of the target graph will be initiated. That is why the linear multiplier m is apphed to Eq. (7). 

Figure 12 ModBase, a database of comparative protein stracture models. Screenshots of the following ModBase panels are shown A form for searching for the models of a given protein, summary of the search results, summary of the models of a given protein, details about a single model, alignment on which a given model was based, 3D model displayed by RASMOL [237], and a model evaluation by the Prosall profile [217],...

Several types of computer models have been developed for estimating the expected concentrations of the chemicals of interest as they move away from the source. Soil transport models attempt to estimate the expected concentration at the surface above buried sources. Plume transport models attempt to estimate the concentrations within a plume, along with its shape and position. A different form of model is designed to guide a search pattern for employing a sensing system to trace a plume. 

Try to find signals suitable as entering points for subsequent signal assignments. Check the spectrum to establish first J-connectivities. Search for identical J-splittings in the case of simple spectra and/or search for characteristic distortions of line intensities (well known in it.s simplest form for AB-spectra). 

Coordinate Representation. A coordinate representation of a chemical substance is a recording of the atoms and bonds of that substance with an indication of their relative position in a plane. This coordinate representation provides a valuable form to facilitate on-line, real-time manipulation of the structure diagram and to store the diagram for subsequent composition in journals, handbooks, and search output. Because this representation is difficult to manipulate, it is typically converted to some other form for other information system functions. Farmer and Schehr [11] describe the approaches and capabilities used at CAS for representing and processing a coordinate form of structure diagrams. 

The ProtSite search can be conducted at ScanProsite tool (selecting Scan a sequence for the occurrence of PROSITE patterns) of ExPASy Proteomic tools (http //www.expasy.ch/tools/scnpsite.html), or PPSearch of EBI (http //www2.ebi.ac. uk/ppsearch/) or ProfileScan server (http //www.isrec.isb-sib.ch/software/PFSCAN form.html). On the search form, paste the query sequence, select options (e.g., display in PPSearch and databases in ProfileScan) and click the Run/Start the Scan button. The search results are returned (after clicking SEView applet button in ProfileScan) with different outputs as shown in Figure 12.16. 

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