Pyrococcus horikoshii

Kakuta, Y., Tahara, M., Maetani, S., Yao, M., Tanaka, I., and Kimura, M. (2004). Crystal structure of the regulatory subunit of archaeal initiation factor 2B (aIF2B) from hyper-thermophilic archaeon Pyrococcus horikoshii OT3 A proposed structure of the regulatory subcomplex of eukaryotic IF2B. Biochem. Biophys. Res. Commun. 319, 725—732. 

Fig. 6. Distribution of the most common folds in selected bacterial, archaeal, and eukaryotic proteomes. The vertical axis shows the fraction of all predicted folds in the respective proteome. Fold name abbreviations FAD/NAD, FAD/NAD(P)-binding Rossman-like domains TIM, TIM-barrel domains SAM-MTR, S-adenosylmethionine-dependent methyltransferases PK, serine-threonine protein kinases PP-Loop, ATP pyrophosphatases. mge, Mycoplasma genitalium rpr, Rickettsiaprowazekii hh x, Borrelia burgdorferi ctr, Chlamydia trachomatis hpy, Helicobacter pylori tma, Thermotoga maritima ssp, Synechocystis sp. mtu, Mycobacterium tuberculosis eco, Escherichia coli mja, Methanococcus jannaschii pho, Pyrococcus horikoshii see, Saccharomyces cerevisiae, cel, Caenorhabditis elegans.

Perugino, G., Falcicchio, P., Corsaro, M.M., Matsui, I., Parrilli, M., Rossi, M., and Moracci, M., (2006) Preparation of a glycosynthase from the P-glycosidase of the hyperthermophilic Archaeon Pyrococcus horikoshii. Biocat, Biotrans., 24, 23-29... 

Figure 12.11 Superposition of active sites from the different proteins. The active site of SmeHyuA model (gray) is compared with that of (a) aspartate racemase from Pyrococcus horikoshii (IF)LA, black) and that of (b) glutamate racemase from Aquifex pyrophilus (1B73A, black).

Pyrococcus horikoshii LysRS IIRX CySa/) 2 HisL 18 CySa/j 3 HiS2byS... 

Olivers FT, Tahirov TH. Structure of Pyrococcus horikoshii NikR nickel sensing and implications for the regulation of DNA recognition. J. Mol. Biol. 2005 348 597-607. 

Yemool, D., Boudker, O., Jin, Y., and Gouaux, E. (2004) Structure of a glutamate transporter homologue from Pyrococcus horikoshii. Nature, 431, 811-818. 

Pyrococcus horikoshii EysRS HRX Cysa/i 2 HisL 18 CySa/i 3 His2b/i... 

The number of amino acids in each intein is indicated, while the absence of an intein is indicated by a dash (—). Pab, Pyrococcus abyssi Pho, Pyrococcus horikoshii OT3 PJu, Pymcoccusfuriosus Mja, Methanococcus jannaschii Mth, Methanobacterium thermoautoirophicum (delta H strain) Ape, Aempynm pemix. 

Ishijima J, Uchida Y, Kuroishi C, Tuzuki C, Takahashi N, Okazaki N, Yutani K, Miyano M Crystal structure of alanyl-tRNA synthetase editing-domain homolog (PH0574) from a hyperthermophile, Pyrococcus horikoshii OT3 at 1.45 A resolution. Proteins 2006, 62(4) 1133—1137. 

Methanococcus jannaschii, Pyrococcus horikoshii, Archaeoglobus fulgidus ... 

Archaeoglobus fulgidus, Pyrococcus horikoshii B. subtilis, Synechocystis sp., Aquifex aeolicus S. cerevisiae ... 

Theriot, C.M., Semcer, R.L., Shah, S.S., et al., 2011. Improving the catalytic activity of hyperthermophilic Pyrococcus horikoshii prolidase for detoxification of organophosphorus nerve agents over a broad range of temperatures. Archaea article ID 565127, doi 10.1155/2011/565127. 

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