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Proton translocation models directly involving the Schiff base nitrogen

In all these models cis-trans isomerization is assumed to follow the light-initiated intramolecular proton translocation. [Pg.315]

Proton translocation to the Schiff base nitrogen was proposed to occur by concerted double proton transfer (as shown in Fig. 15) leading to a retro retinal structure in the batho intermediate [127, 196], However, this model can be eliminated as it is inconsistent with the formation of batho intermediates from pigment analogs based on 5-desmethylretinal [145] and y-retroretinal [146,147], It also disagrees with the resonance Raman results. [Pg.315]

A mechanism involving deprotonation of the Schiff base nitrogen [197] as the primary event is now considered unlikely because of resonance Raman experiments and also because deprotonation would lead to blue shift rather than the observed red shift in bathorhodopsin. [Pg.316]

In a model proposed by Lewis [228] the effect of the excited state of retinal on the conformational state of the protein is considered to be the first step of the excitation mechanism. Charge redistribution in the retinal by excitation with light would have the consequence of vibrationally exciting and perturbing the ground state conformation of the protein, i.e., excited retinal would induce transient charge density assisted bond rearrangements (e.g., proton translocation). Subsequently, retinal would assume such an isomeric and conformational state so as to stabilize maximally the new protein structure established. In this model, 11-m to trans isomerization would not be involved in the primary process, but would serve to provide irreversibility for efficient quantum detection. It was also proposed that either the 9-m-retinal (in isorhodopsin) or the 11-m-retinal (in rhodopsin) could yield the same, common [Pg.316]


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Base protonation

Bases protonic

Model direct

Nitrogen bases

Nitrogen model

Nitrogen modelled

Nitrogen modelling

Nitrogen, protonated

Nitrogeneous bases

Nitrogenous bases

Proton translocation

Proton translocation models

Proton translocators

Protonated base

Schiff base nitrogen

Schiff bases, protonated

The Directive

The Proton

Translocated

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