Proteins hydrazide-activated

Hydrazide-activated proteins are stable to long-term storage at 4°C in the presence of a preservative (0.05 percent sodium azide) or in a frozen or lyophilized state. 

Most proteins contain an abundance of carboxylic acid groups from C-terminal functionalities and aspartic and glutamic acid side chains. These groups are readily modified with bis-hydrazide compounds to yield useful hydrazide-activated derivatives. Both carbohydrazide and adipic acid dihydrazide have been employed in forming these modifications using the carbodi-imide reaction (Wilchek and Bayer, 1987). 

In a fume hood, add 10 pi of 5M sodium cyanoborohydride (Sigma) per ml of reaction solution. Caution Cyanoborohydride is extremely toxic. All operations should be done with care in a fume hood. Also, avoid any contact with the reagent, as the 5M solution is prepared in IN NaOH. The addition of a reductant is necessary for stabilization of the Schiff bases formed between an amine-containing protein and the aldehydes on the antibody. For coupling to a hydrazide-activated protein, however, most protocols do not include a reduction step. Even so, hydrazone linkages may be further stabilized by cyanoborohydride reduction. The addition of a reductant during hydrazide/aldehyde reactions also increases the efficiency and yield of the reaction. 

Imide Bond Formation with Terminal Hydrazide Group (a hydrazide-activated protein)... 

Dissolve a hydrazide-containing enzyme or other protein at a concentration of 10 mg/ml in 0.1 M sodium phosphate, 0.15 M NaCl, pH 7.2. For the preparation of a hydrazide-activated enzyme see Chapter 16, Section 2.4. For modification with a hydrazide-containing probe, such as biotin-hydrazide, use a concentration of 5 mM in the phosphate buffer. For conjugation through the amine groups of a secondary molecule, dissolve the amine-containing protein at 10 mg/ml in 0.2 M sodium carbonate, pH 9.6. 

Fig. 11. Formation and isolation of a [i- CJacetyl-N-acetyltransferase intermediate from a rapid inactivator rabbit liver. The DEAE-cellulose enzyme fraction (2.5 mg protein, specific activity 0.0395 /imole 2-acetylisonicotinic acid hydrazide formed per min per mg protein) was mixed with 16.4 nmoles of [i- C]acetyl-CoA (58.5 mC/mmole) and 0.01 M potassium phosphate buffer, pH 7.0, in a total volume of 0.40 ml. After 12 min of incubation at 27° the reaction mixture was cooled to 0°, placed on a Sepha-dex G-50 column (L5 cm X 18.5 cm) and eluted with 0.01 M potassium phosphate buffer, pH 7.0, at 0°. A flow rate of 1.0 ml/min was maintained and fractions of 1.0 ml each were collected over a 20-min period. The fractions were analyzed for radioactivity and for absorbance at 280 nm (A). The experiment was repeated with enzyme previously inactivated by heat at 55° for 15 min (B). In C, DEAE-cellulose enzyme fraction (2.5 mg protein, specific activity 0.0395 Ajmole 2-acetylisonicotinic acid hydra-...

Aziridinium ion-based click chemistry provides convenient access to pyrazolo[l,2-ajpyrazoles, active inhibitors of penicillin-binding proteins [58, 59]. Ring-opening of aziridinium ions 32 at the benzylic position with hydrazine, followed by intramolecular cyclization, gave pyrazolidin-3-ones 37 in excellent yields (Scheme 12.27). Heating of the hydrazides 37 with aromatic aldehydes at reflux in absolute... 

In aqueous solutions, the easiest method for forming this type of bond is to use the water-soluble carbodiimide EDC (Chapter 3, Section 1.1). For proteins and other water-soluble macromolecules, EDC reacts with their available carboxylate groups to form an intermediate, highly reactive, o-acylisourea. This active ester species may further react with nucleophiles such as a hydrazide to yield a stable imide product (Figure 1.109). 

Hydrazide groups can react with carbonyl groups to form stable hydrazone linkages. Derivatives of proteins formed from the reaction of their carboxylate side chains with adipic acid dihydrazide (Chapter 4, Section 8.1) and the water-soluble carbodiimide EDC (Chapter 3, Section 1.1) create activated proteins that can covalently bind to formyl residues. Hydrazide-modified enzymes prepared in this manner can bind specifically to aldehyde groups formed by mild periodate oxidation of carbohydrates (Chapter 1, Section 4.4). These reagents can be used in assay systems to detect or measure glycoproteins in cells, tissue sections, or blots (Gershoni et al., 1985). 

If a free amino group forms a portion of the protein that is essential for activity (e.g., the antigen-combining site for antibody), biotinylation with the succinimide ester will lower or destroy the activity of the protein, and other methods of labeling should be tried. Biotin hydrazide has been used to modify the carbohydrate moieties of antibodies (10,11). Other alternatives are the thiol-reactive biotin maleimide (12) or biotin iodoacetamide (13). 

Major hydrolysis reactions are ester and amide hydrolysis. These are catalyzed by a group of enzymes with overlapping substrate specificity and activity. Hydrazides can also undergo hydrolysis. Some of the newer drugs such as hormones, growth factors, and cytokines now being produced are peptides, and certain toxins are also peptides or proteins, so the role of peptidases may be important. 

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