Protein binding microarrays

Bulyk ML. Analysis of sequence specificities of DNA-binding proteins with protein binding microarrays. Methods Enzymol. 2006 410 279-299. 

Resources Required for Protein Binding Microarray Experiments. 71... 

Analysis of Publicly Available Gene Expression Datasets to Identify Conditions in Which a Significant Fraction of Protein Binding Microarray-Derived Target Genes... 

Keywords Protein binding microarray DNA binding site motif ... 

Fig.l Scheme of protein binding microarray experiments. (Reproduced from [26] with permission from Nature Publishing Group.)... 

Identification of the DNA Binding Site Motif from the Protein Binding Microarray Data... 

Mukherjee et al. combined the analysis of TFs (Abfl, Rapl and Migl) binding to ds genomic DNA microarrays with ChIP-on-chip data, revealing a degree of overlap but also differences between the two experiments [14], It was clear that the data from protein-binding microarrays (PBMs)—as defined by Mukherjee et al.—provide valuable information, particularly for poorly understood TFs. 

Bulyk, M.L Protein Binding Microarrays for the Characterization of DNA-Protein Interactions. Vol. 104, pp. 65-85. 

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