Phylogenetic identification

Amann, R. I. Ludwig, W. Schleifer, K. H. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 1995, 59,143-169. 

H. Schleifer, Phylogenetic identification and in-situ detection of individual microbial cells without cultivation,... 

Amann RI, Ludwig W, Schleifer KH (1995) Phylogenetic Identification and In Situ Detection of Individual Microbial Cells Without Cultivation. Microbiol Rev 59 143... 

E. F. DeLong, G. S. Wickham, and N. R. Pace, Phylogenetic stains ribosomal RNA-based probes for the identification of single cells. Science 245 1360 (1989). 

Reviews on the fate of aromatic hydrocarbons in marine organisms have been published (2,3,4). They indicated that a substantial amount of information exists on the accumulation of these compounds in a variety of phylogenetically diverse organisms. Recently, emphasis has shifted toward studies of bioconversions of these hydrocarbons. Work has been conducted on enzymes mediating the degradation of aromatic hydrocarbons and on the formation and retention of metabolites. Identifications of individual metabolites in tissues and body fluids of several marine organisms exposed to radiolabeled aromatic hydrocarbons have been made however, insufficient information is available to determine the extent of differences in metabolite profiles as evinced from chromatographic data. 

Oatps/OATPs were newly classified within the OATP (protein)/SLCO (gene) (human) and Oatp (protein)AS7co (gene) (rodents) superfamily according to their phylogenetic relationships and chronology of identification. The methods of classification and the nomenclature were described in detail in a recent review [21],... 

Suzuki, H. et al.. Identification and characterization of a novel anthocyanin malonyltransferase from scarlet sage Salvia splendens) flowers an enzyme that is phylogenetically separated from other anthocyanin acyltransferases. Plant J., 38, 994, 2004. 

Berezikov E, Guryev V, van de Belt J et al. Phylogenetic shadowing and computational identification of human mieroRNA genes. Cell 2005 120 21-24. 

Zhu J., Kozlov M. V., Philipp P., Franke W. and Lofstedt C. (1995) Identification of a novel moth sex pheromone in Eriocrania ciacatricella (Zett.) (Lepidoptera Eriocraniidae) and its phylogenetic implications. J. Chem. Ecol. 21, 29-43. 

Boutros PC, Moffat ID, Franc MA, Tijet N, Tuomisto J, Pohjanvirta R, Okey AB. Dioxin-responsive AHRE-II gene battery identification by phylogenetic footprinting. Biochem Biophys Res Commun 2004 321 707-715. 

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