Peptide branching

The aminolysis of the 7-benzyl ester can be catalyzed by 1-hydroxy-benzotriazole [15]. rhen 1.2 eq. of [15] was added to a solution of [14a] with a twenty fold excess of butyl amine, 64%, 72% and 75% conversion of the benzyl ester to amide was obtained in 6, 11, and 24 hrs., respectively (Figure 5). Cleavage of the peptide bonds was minimized under these conditions. The average DP of the peptide branches in [14a] is four, but only three of the amino acid residues are reacting rapidly. It appears that the amino acid bound directly to the backbone polymer is subject to more steric hindrance and may be more difficult to transform. 

The group of peptides known as tachykinins include substance P, substance K or neurokinin A, and neuromedin K, ie, neurokinin B, as well as a number of nonmammalian peptides. All members of this family contain the conserved carboxy-terrninal sequence Phe-X-Gly-Leu-Met-NH2, where X is an aromatic, ie, Phe or Tyr, or branched aliphatic, eg, Val or lie, amino acid. In general, this C-terminal sequence is cmcial for tachykinin activity (33) in fact, both the methionineamide and the C-terminal amide are cmcial for activity. The nature of the X residue in this sequence determines pharmacological identity (34,35) thus the substance P group contains an aromatic residue in this position, while the substance K group contains an aliphatic residue (33). 

The surrounding redness caused by the vasodilatation of local blood vessels in the skin (hyperaemia). Histamine released at the site of contact acts on sensory nerve endings in the skin. Impluses travel along the axon to other peripheral branches of the same neuron to cause release of vasodilataory peptide neurotransmitters from nerve endings serving a wider area of skin than the initial contact point. Impluses reaching the CNS are interpreted as itch and pain. 

A major sorting decision is made early in protein biosynthesis, when specific proteins are synthesized either on free or on membrane-bound polyribosomes. This results in two sorting branches called the cytosolic branch and the rough endoplasmic reticulum (R R) branch (Figure 46-1). This sorting occurs because proteins synthesized on membrane-bound polyribosomes contain a signal peptide that mediates their attachment to the membrane of the ER. Further details on... 

Other types of branched peptide dendrimers, known as multiple antigen peptides (MAPs), have been synthesized to mimic proteins for applications, for instance as synthetic vaccines, serodiagnostics, peptide inhibitors and intracellular delivery vehicles. Since this concept has been recently described in detail elsewhere [11], only the conceptual framework will be briefly presented here. Tam and coworkers have developed a dendritic core based on lysine units for the construction of MAPs [12-15] (Fig. 3). Carrying antigens at their periphery these MAPs have been designed to increase antigenicity and immunogenicity of peptides. 

Two dendrimers based on Fe-porphyrin core carrying peptide-like branches of different sizes have been synthesized in order to have more open and a more densely packed (23) structures [43]. The electrochemical behavior has been examined in CH2C12 and in aqueous solution. In the less polar solvent, the two dendrimers show similar potentials for the Fem/Fen couple, suggesting that the iron porphyrins in both the more open and the more densely packed dendrimers experience similar microenvironments. On the contrary, in water the behavior of the two dendrimers is very different since the reduction from Fem to Fe11 is much easier for the densely packed dendrimer. This result can be explained considering that in the dendrimer with the relatively open structure the aqueous solvation of the iron porphyrin is still possible, whereas in the densely packed one the contact between the heme and the external solvent is signifi-... 

The minimal cell, as the simplest system which has all the required properties of life (metabolism, self-reproduction and the ability to evolve), is presently studied as part of a new research discipline synthetic biology. This includes subjects such as synthesis in branches of biological systems, for example, of new RNA species, new peptides and new nucleic acid analogues, as well as the synthesis of peptide nucleic acids. One example is the work of M. R. Ghadiri and G. von Kiedrowski on self-replication of oligonucleotides and oligopeptides (Luisi, 2006b). 

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