PEP mutase

C-P bonds are present in a range of natural compounds, for example, antibiotics. Through a reaction of PEP mutase, phosphoenolpyruvate is converted to phosphonopyruvate, which is the precursor of all natural phosphono compounds. The ThDP-dependent enzyme phosphonopyruvate decarboxylase (PPD) has been discovered in several Streptomycetes and other bacteria [24] its reaction is depicted in Scheme 2.2.2.3. 

The lipids of some organisms, such as Tetrahymena, contain aminoethylphosphonate, a compound with a C-P bond (Chapter 8). There are also many other naturally occurring phosphono compounds and huge quantities of synthetic phosphonates, present in detergents, herbicides, and insecticides, are metabolized by bacteria 297 Here we will consider only one step in the biosynthesis of phosphonates, the conversion of PEP into phosphonopyruvate (Eq. 13-54), a reaction catalyzed by PEP mutase. The phospho group is moved... 

Xu, D.> Guo, H. (2008). Ab Initio QM/MM studies of the phosphoryl transfer reaction catalyzed by PEP mutase suggest a dissociative metaphosphate transition state. Journal of Physical Chemistry B, 112, 4102. 

Aryl side chain containing L-a-amino acids, such as phenylalanine (Phe), tyrosine (Tyr), and tryptophan (Trp), are derived through the shikimate pathway. The enzymatic transformation of phosphoenolpyr-uvate (PEP) and erythro-4-phosphate, through a series of reactions, yields shikimate (Scheme 2). Although shikimate is an important biosynthetic intermediate for a number of secondary metabolites, this chapter only describes the conversion of shikimate to amino acids containing aryl side chains. In the second part of the biosynthesis, shikimate is converted into chorismate by the addition of PEP to the hydroxyl group at the C5 position. Chorismate is then transformed into prephenate by the enzyme chorismate mutase (Scheme 3). 

Figure 2.5 Logarithmic scale comparison of k,d and kuncat (= (rnon) for some representative reactions at 25 °C. The length of each vertical bar represents the rate enhancement. (Wolfenden, 2001). ADC arginine decarboxylase ODC orotidine 5 -phosphate decarboxylase STN staphylococcal nuclease GLU sweet potato /3-amylase FUM fumarase MAN mandelate racemase PEP carboxypeptodase B CDA E. coli cytidine deaminase KSI ketosteroid isomerase CMU chorismate mutase CAN carbonic anhydrase.

Figure 4.11). This reaction, a Claisen rearrangement, transfers the PEP-derived side-chain so that it becomes directly bonded to the carbocycle, and so builds up the basic carbon skeleton of phenylalanine and tyrosine. The reaction is catalysed in nature by the enzyme chorismate mutase, and, although it can also occur thermally, the rate increases some 106-fold in the presence of the enzyme. The enzyme achieves this by binding the pseudoaxial conformer of chorismic acid, allowing a transition state with chairlike geometry to develop. 

PEP is converted to fructose 1,6-bisphosphate in a series of steps that are a direct reversal of those in glycolysis (see Topic J3), using the enzymes enolase, phosphoglycerate mutase, phosphoglycerate kinase, glyceraldehyde 3-phosphate dehydrogenase, triose phosphate isomerase and aldolase (see Fig 1). This sequence of reactions uses one ATP and one NADH for each PEP molecule metabolized. 

For this group of aminomutases PEP is required as a second coenzyme. Third, X is attached via a carbon atom the enzymes are called mutases. Methyl-malonyl-Co mutase is required for catabolism of propionate in the human body, and is one of only two known vitamin B j-... 

The assay of 2,3-DPG is based on an equilibrium system between 3-phosphoglycerate, 2-phosphoglycerate, and PEP when monophosphoglycerate mutase (MPGM) and enolase are present. 

Figure 14 Biosynthesis of PKS-NRPS hybrid compounds in myxobacteria (b). Biosynthesis of chondramide D (34) in Chondromyces crocatus Cm c5. The DH domain from module 1 (marked with an asterisk) is most likely inactive. During the assembly of the chondramide backbone, an unusual extender unit - a /3-amino acid - is incorporated by NRPS module 6. The precursor is generated by the tyrosine amino mutase (TAM) CmdF, which converts L-tyrosine into R-/3-tyrosine (see box). The function of the terminal phosphoenolpyruvate synthase (PEP) domain is still unknown. Macrocyclization catalyzed by the TE domain yields chondramide C (40), which can be further transformed to the chlorinated derivative chondramide D (34). The halogenation process catalyzed by CmdE may also take place on the assembly line intermediate.

Alanine synthesis from 3-PGA in the dark. Intact BSS (50 pg chlorophyll/ml) were incubated for two minutes with the additions indicated and the reaction was started by adding 3-PGA at 30 C. At various times, the reaction was stopped by 3% HCIO4 and after neutralizing with KOH metabolites were assayed spectrophotometrically (6) in the following sequence pyruvate with lactate dehydrogenase, PEP with pyruvate kinase, 2-PGA with enolase and 3-PGA with phosphoglycerate mutase. Alanine was assayed according to ref(7). 

L-Tyrosine biosynthesis starts with the condensation of phosphoenolpyruvate (PEP) and erythrose-4-phosphate (E4P), the intermediates of the glycolytic pathway and pentose phosphate pathway, respectively, which is catalyzed by 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHPS aroE/aroG/aroH). The resultant 3-deoxy-D-arabino-heptulosonate (DAHP) is converted into chorismate through the shikimate pathway with seven reactions. In plants, prephenate (PPA) is converted into L-arogenate by transamination whereas in E. coli, PPA is converted to p-hydroxyphenylpyruvate (HPP) by prephenate dehydrogenase, which is a bifunctional enzyme that behaves as chorismate mutase/prephenate... 

The carbon flow from 3-phosphoglycerate, phosphoenolpyruvate, pyruvate and acetyl-CoA. Even if the synthesis of aromatic amino acids by shikimate pathway /28,29,30,31/ and also prenyl-PP synthesis via mevalonate /32,33,34/ has been established in chloroplasts by identification of respective plastidic enzymes, it is still a matter of discussion from where PEP origins to supply DAHP synthesis of the shikimate pathway and from where pyruvate is delivered to supply the plastidic pyruvate dehydrogenase complex (for isolation see Treede and Heise, this Conference). Because phosphoglycerate mutase (PGM) to form 2-PGA from 3-PGA could not be detected in chloroplasts /35/ and acetyl-CoA is preferably synthesized from added acetate by the actetyl-CoA synthetase /36/, particularly in spinach chloroplasts, it was argued that chloroplasts are dependent on import of these substrates from the external site. Evidence for PEP formation from 3-PGA within the chloroplast could be obtained by three different approaches (D. Schulze-Siebert, A. Heintze and G. Schultz, in preparation D. Schulze-Siebert and G. Schultz, in preparation, for plastidic isoenzyme of PGM in Ricinus see /37/ and in Brassica /38/). 

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