Pentose phosphate pathway group-transfer reactions

Both catalyze chain cleavage and transfer reactions (Eqs. 17-14 and 17-15) that involve the same group of substrates. These enzymes use the two basic types of C-C bond cleavage, adjacent to a carbonyl group (a) and one carbon removed from a carbonyl group ((3). Both types are needed in the pentose phosphate pathways just as they are in the citric acid cycle. The enzymes of the pentose phosphate pathway are found in the cytoplasm of both animal and plant cells.n7c Mammalian cells appear to have an additional set that is active in the endoplasmic reticulum and plants have another set in the chloroplasts.117c... 

The reactions enclosed within the shaded box of Fig. 17-14 do not give the whole story about the coupling mechanism. A phospho group was transferred from ATP in step a and to complete the hydrolysis it must be removed in some future step. This is indicated in a general way in Fig. 17-14 by the reaction steps d, e, and/. Step/represents the action of specific phosphatases that remove phospho groups from the seven-carbon sedoheptulose bisphosphate and from fructose bisphosphate. In either case the resulting ketose monophosphate reacts with an aldose (via transketolase, step g) to regenerate ribulose 5-phosphate, the C02 acceptor. The overall reductive pentose phosphate cycle (Fig. 17-14B) is easy to understand as a reversal of the oxidative pentose phosphate pathway in which the oxidative decarboxylation system of Eq. 17-12 is... 

Stage 2 of the pentose phosphate pathway. The groups in red are those transferred in transketolase-catalyzed reactions. The groups in bold type are transferred in the transaldose-catalyzed reactions. All of... 

NAD tends to be an electron acceptor in catabolic reactions involving the degradation of carbohydrates, fatty acids, ketone bodies, amino acids, and alcohol. NAD is used in energy-producing reactions. NADP, which is cytosolic, tends to be involved in biosynthetic reactions. Reduced NADP is generated by the pentose phosphate pathway (cytosolic) and used by cytosolic pathways, such as fatty acid biosynthesis and cholesterol synthesis, and by ribonucleotide reductase. The niacin coenzymes are used for two-electron transfer reactions. The oxidized form of NAD is NAD". There is a positive charge on the cofactor because the aromatic amino group is a quaternary amine. A quaternary amine participates in four... 

In the remaining steps of the pentose phosphate pathway, several reactions involve transfer of two- and three-carbon units. To keep track of the carbon backbone of the sugars and their aldehyde and ketone functional groups, we shall write the formulas in the open-chain form. 

Group-Transfer Reactions in the Pentose Phosphate Pathway... 

Yes. The pathway that appears in most biochemistry textbooks is that in Fig. 11-26. It was described by Bernard Horecker in 1955. It appears to be the pathway that operates in adipocytes, red blood cells, and many other cell types hence its name the F-type (for fat-type). However, the possibility exists that other forms of group transfer reactions could take place via transketolase and aldolase, in the absence of transaldolase. It is thought that this more complicated reaction scheme operates in the liver, so it was called the L-type (for liver-type) pentose phosphate pathway by its main proponent John Williams. 

Transketolase (TK) is involved in anaerobic carbohydrate metabolisms such as the nonoxidative phase of the pentose phosphate pathway. In plants and photosynthetic bacteria, TK is involved in the Calvin-Benson cycle. TK catalyses the transfer of a 2-carbon dihydroxyethyl group from a ketose phosphate (donor substrate such as D-xylulose 5-phosphate) to the Cl position of an aldose phosphate (acceptor substrate such as o-ribose 5-phosphate) (Figure 4.3) (Schneider and Lindqvist 1998). The first product is an aldose phosphate released from the donor (such as glyceraldehyde 3-phosphate) and the second is a ketose phosphate (such as sedoheptulose 7-phosphate), in which the 2-carbon fragment is attached to the acceptor. Examples of the substrates and the products mentioned above are for the first reaction of the pentose phosphate pathway. In the second reaction of the same pathway, the acceptor is D-ery-throse 4-phosphate and the second product is o-fructose 6-phosphate. A snapshot X-ray crystallographic study revealed that an ot-carbanion/enamine a,p-dihydroxyethyl ThDP is formed as a key intermediate (Fiedler et al. 2002). Then, a nucleophilic attack of the a-carbanion intermediate on the acceptor substrate occurs. 

A most important clue to the nature of the steps between pentose phosphate and hexosemonophosphate, and thus to the role of the pentose phosphate pathway in photosynthesis, came from our discovery in 1953 of sedoheptulose 7-phosphate as the first product formed from pentose phosphate. The enzyme transketolase had been purified from rat liver and spinach in my laboratory and crystallized from yeast by Racker and his coworkers and the two laboratories simultaneously discovered that this enzyme contained thiamine pyrophosphate as its functional group, f Isotope studies in my laboratory showed that sedoheptulose was formed by the transfer of a C2 group ( active glycolaldehyde ) from one molecule of pentose phosphate to another, and that the reaction was fully reversible thus sedoheptulose 7-phosphate was also a Ca-donor. In addition, Racker s laboratory made the important finding that fructose 6-phosphate would also yield active glycolaldehyde, and Arturo Bonslgnore and his coworkers discovered that rat liver extracts catalyzed the rapid non-oxidative conversion of hexose phosphate to sedoheptulose phosphate. ... 

Tissues which are more active in the synthesis of lipids than nucleotides require NADPH rather than ribose moieties. In such tissues, e.g. adipose tissue, the ribose 5-phosphate enters a series of sugar interconversion reactions which connect the pentose phosphate pathway with glycolysis and gluconeogenesis. These interconversion reactions constitute the non-oxidative phase of the pathway (Figure 11.14) and since oxidation is not involved, NADPH is not produced. Two enzymes catalyse the important reactions transketolase which contains thiamin diphosphate (Figure 12.3a) as its prosthetic group and transaldolase. Both enzymes function in the transfer of carbon units transketolase transfers two-carbon units and transaldolase transfers three-carbon units. The transfer always occurs from a ketose donor to an aldose acceptor. The interconversion sequence requires the oxidative phase to operate three times, i.e. three molecules of glucose 6-phosphate yield three molecules of ribulose 5-phosphate. 

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