Isotopically labeled amides

Fujisaki, H. Straub, J. E., Vibrational energy relaxation of isotopically labeled amide I modes in cytochrome c Theoretical investigation of vibrational energy relaxation rates and pathways. J. Phys. Chem. B 2007, 111, 12017-12023. 

Fig. 8. Theoretical simulation of VCD (top) and IR absorption (bottom) spectra of alanine dodecapeptides for the amide V bands for a fully a-helical conformation (left) and a fully left-handed 3i-helical conformation (right). The simulations are for the same three isotopically labeled (13C on the amide C=0 for four Ala residues selected in sequence) peptides as in Figure 7 N-terminal tetrad (4AL1), middle (4AL2), and C-terminal (4AL4). The 13C feature is the same for all sequences, confirming the experimentally found unfolding of the C-terminus. The agreement with the shapes in Figure 7 is near quantitative. Reprinted from Silva, R. A. G. D., Kubelka, J., Decatur, S. M., Bour, R, and Keiderling, T. A. (2000a). Proc. Natl. Acad. Sci. USA 97, 8318-8323. 2000 National Academy of Science, U.S.A.

Dianions of the above types may not fall into the category of homoenolate in a strictly formal sense. Nevertheless the amide dianion does show a behavior typical of the homoenolate. Thus, the reaction of the isotopically labeled stannylpropionate results in scrambling of the label probably via a cyclopropane intermediate Eq. (47) [44]. As the result of such an equilibration, isomerization of a-methyl and a-phenyl substituted propionate homoenolates may occur to give the thermodynamically more favorable isomers, respectively. 

Allylic amide isomerization, 117 Allylic amine isomerization ab initio calculations, 110 catalytic cycle, 104 cobalt-catalyzed, 98 double-bond migration, 104 isotope-labeling experiments, 103 kinetics, 103 mechanism, 103 model system, 110 NMR study, 104 rhodium-catalyzed, 9, 98 Allylnickel halides, 170 Allylpalladium intermediates, 193 Allylsilane protodesilylation, 305 Aluminum, chiral catalysts, 216, 234, 310 Amide dimers, NMR spectra, 282, 284 Amines ... 

In this chapter the focus is on a few structures that serve to highlight the key factors controlling the structures of chiral lithium amides in general. For a complete review on structures of lithium amides there are a number of excellent articles5-10. The structures of the chiral lithium amides discussed herein have been determined either by X-ray analysis or by multinuclear NMR spectroscopy of isotopically labelled compounds. The basics of lithium amide structures and in particular the structures and dynamics of chiral lithium amides will be presented. 

Ahlberg and coworkers noted that in some cases the enantioselectivity was increased when running the deprotonations with equimolar amounts of the novel bulk bases and the chiral lithium amide113. This finding initiated a detailed mechanistic investigation using isotopically labeled compounds and multinuclear NMR spectroscopy and kinetics, to elucidate the nature of the reagents and transition states in the deprotonations. They discovered that mixed dimers 23 and 24 are formed in solution from monomers of chiral lithium amide 20 and bulk base 21 and 22, respectively (Scheme 73). 

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