Internal energy vibrational contribution

The Gibbs free energy G and the chemical potentials include contributions from the internal energy, vibrational free energy, and configurational entropy. Since most relevant stmctures will have a low surface free energy, we obtain from (5.4) that... 

Phonons are nomial modes of vibration of a low-temperatnre solid, where the atomic motions around the equilibrium lattice can be approximated by hannonic vibrations. The coupled atomic vibrations can be diagonalized into uncoupled nonnal modes (phonons) if a hannonic approximation is made. In the simplest analysis of the contribution of phonons to the average internal energy and heat capacity one makes two assumptions (i) the frequency of an elastic wave is independent of the strain amplitude and (ii) the velocities of all elastic waves are equal and independent of the frequency, direction of propagation and the direction of polarization. These two assumptions are used below for all the modes and leads to the famous Debye model. 

Information about the structure of a molecule can frequently be obtained from observations of its absorption spectrum. The positions of the absorption bands due to any molecule depend upon its atomic and electronic configuration. To a first approximation, the internal energy E oi a, molecule can be regarded as composed of additive contributions from the electronic motions within the molecule (Et), the vibrational motions of the constituent atoms relative to one another E ), and the rotational motion of the molecule as a whole (Ef) ... 

Table A4.1 summarizes the equations needed to calculate the contributions to the thermodynamic functions of an ideal gas arising from the various degrees of freedom, including translation, rotation, and vibration (see Section 10.7). For most monatomic gases, only the translational contribution is used. For molecules, the contributions from rotations and vibrations must be included. If unpaired electrons are present in either the atomic or molecular species, so that degenerate electronic energy levels occur, electronic contributions may also be significant see Example 10.2. In molecules where internal rotation is present, such as those containing a methyl group, the internal rotation contribution replaces a vibrational contribution. The internal rotation contributions to the thermodynamic properties are summarized in Table A4.6.

In the classical limit where the condition << kgT is met for the trapping vibrations, the rate constant for electron transfer is given by eq. 6. In eq. 6, x/4 is the classical vibrational trapping energy which includes contributions from both intramolecular (X ) and solvent (XQ) vibrations (eq. 5). In eq. 6 AE is the internal energy difference in the reaction, vn is the frequen-... 

Thus, a molecule may exist in many states of different energy. The internal energy in a certain state may be considered to be made up of contributions from rotational energy, E ou vibrational energy, E vib and electronic energy, E i as described by equation (5.2) ... 

The thermal internal energy function calculated at 298.15 K [E — 0] is also listed in Table 8.1. The translational and rotational contributions are found using Eqs. 8.80 and 8.82, respectively. The vibrational contributions (Eq. 8.84) are much less, as expected. Mode 2 makes a significant contribution to the total internal energy at this temperature. Vibrational modes 5 and 6 also make smaller, but nonnegligible, contributions. The electronic contribution was calculated directly from Eq. 8.76. Through application of Eq. 8.118, the total enthalpy is [H — Ho] - 11146.71 J/mole. 

For a temperature of 298.15 K, a pressure of 1 bar, and 1 mole of H2S, prepare a table of (1) the entropy (J/mol K), and separately the contributions from translation, rotation, each vibrational mode, and from electronically excited levels (2) specific heat at constant volume Cv (J/mol/K), and the separate contributions from each of the types of motions listed in (1) (3) the thermal internal energy E - Eo, and the separate contributions from each type of motion as before (4) the value of the molecular partition function q, and the separate contributions from each of the types of motions listed above (5) the specific heat at constant pressure (J/mol/K) (6) the thermal contribution to the enthalpy H-Ho (J/mol). 

Since each internal vibration contributes two square terms, kinetic energy and potential energy, 4 to 6 internal vibrations must be involved in the activation of the ethers, and about 12 in the activation of azomethane. For most of the molecules, the formulae of which are given in the above table, therefore, the result is very plausible. 

Recent advances in experimental techniques, particularly photoionization methods, have made it relatively easy to prepare reactant ions in well-defined states of internal excitation (electronic, vibrational, and even rotational). This has made possible extensive studies of the effects of internal energy on the cross sections of ion-neutral interactions, which have contributed significantly to our understanding of the general areas of reaction kinetics and dynamics. Other important theoretical implications derive from investigations of the role of internally excited states in ion-neutral processes, such as the effect of electronically excited states in nonadiabatic transitions between two potential-energy surfaces for the simplest ion-molecule interaction, H+(H2,H)H2+, which has been discussed by Preston and Tully.2 This role has no counterpart in analogous neutral-neutral interactions. 

In Section 2.1, we remarked that classical thermodynamics does not offer us a means of determining absolute values of thermodynamic state functions. Fortunately, first-principles (FP), or ab initio, methods based on the density-functional theory (DFT) provide a way of calculating thermodynamic properties at 0 K, where one can normally neglect zero-point vibrations. At finite temperatures, vibrational contributions must be added to the zero-kelvin DFT results. To understand how ab initio thermodynamics (not to be confused with the term computational thermochemistry used in Section 2.1) is possible, we first need to discuss the statistical mechanical interpretation of absolute internal energy, so that we can relate it to concepts from ab initio methods. 

Other thermodynamic functions, in addition to internal energy, can also be calculated from first principles. For example, at a finite temperature, the Helmholtz free energy, A, of a phase containing N atoms of the / th component, Nj atoms of the j th, and so on, is equal to the DFT total energy at zero kelvin (neglecting zero-point vibrations) plus the vibrational contribution (Reuter and Scheffler, 2001) ... 

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