INDEX metal binding

The partition index (IR, which will be discussed in details below) of Cd, Cu, Cr, Ni and Zn in both soils rapidly increased from time zero (calculated value) to one day and further to one year. This was especially true for Cr, Cu and to some extent Ni and Cd (Table 6.5). This result indicates that added trace metals are initially and rapidly transferred from the labile EXC fraction into the more stable fractions. Furthermore, IR of trace metals in native arid soils incubated under the saturated paste regime decreased at the end of year. This indicates mobilization of trace elements in these soils as saturation (Table 6.5). Also, it can be seen that IR decreased, for any given time, with an increase of the loading level (Table 6.5, Fig. 6.5). This means that higher additions of soluble metals result in higher metal content in the labile fractions and lower metal binding intensity in soils. 

A related method for searching triad-type sidechain patterns using a multidimensional index tree was reported by Hamelryck [70], With this approach, mirror images of patterns are detected, which appear to be very common among metal binding sites. 

Fig. 10. A SPR Detection realized in a BIAcore system. A fan of polarized light passes a prism and is focused at the interface to an aqueous phase under conditions of total reflection. An evanescent wave enters the solvent phase. If the prism is coated with a thin gold layer at the interface the free electrons in the metal absorb energy from the evanescent wave for a distinct angle, depending on the refractive index of the solvent near the interface. B The gold layer can be modified with, e.g., a carboxydextrane matrix, where catcher molecules can be immobilized by standard chemistry. If a ligand is applied with the aqueous phase it may interact with the catcher and accumulate in the matrix, causing a shift in the resonance angle. If no specific binding occurs the refractive index in proximity of the sensor is less affected...

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