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Fold-recognition

T. Huber and A.E. Torda, Protein fold recognition without Boltzmann statistics or explicit physical basis, submitted to Protein Sci. (1997). [Pg.223]

Jones D T, W R Taylor and J M Thornton 1992. A New Approach to Protein Fold Recognition. Nature 358 86-89. [Pg.576]

DT Jones. Genthreader An efficient and reliable protein fold recognition method for genomic sequences. J Mol Biol 287 797-815, 1999. [Pg.302]

DT Jones, WR Taylor, JM Thornton. A new approach to protein fold recognition. Nature 358 86-89, 1992. [Pg.303]

AE Torda. Perspectives in protein-fold recognition. Curr Opm Struct Biol 7 200-205, 1997. [Pg.303]

M Levitt. Competitive assessment of protein fold recognition and alignment accuracy. Proteins Suppl 1 92-104, 1997. [Pg.303]

D Eischer, D Eisenberg. Protein fold recognition using sequence-derived predictions. Protein Sci 5 947-955, 1996. [Pg.347]

B Rost, R Schneider, C Sander. Protein fold recognition by prediction-based threading. J Mol Biol 270 471-480, 1997. [Pg.347]

Rice, D.W., et al. A 3D-1D substitution matrix for protein fold recognition that includes predicted secondary structure of the sequence. /. Mol. Biol. 267 1026-1038, 1997. [Pg.372]

Wallace, B. A., and Janes, R. W. (2001). Synchrotron radiation circular dichroism spectroscopy of proteins Secondary structure, fold recognition and structural genomics. Curr. Opin. Chem. Biol. 5, 567-571. [Pg.52]

McDonnell, A. V., Menke, M., Palmer, N., King, J., Cowen, L., and Berger, B. (2006). Fold recognition and accurate sequence-structure alignment of sequences directing beta-sheet proteins. Proteins 63, 976-985. [Pg.94]

PROTEIN FOLD RECOGNITION USING SEQUENCE PROFILES AND ITS APPLICATION IN STRUCTURAL GENOMICS... [Pg.245]

PROTEIN FOLD RECOGNITION USING SEQUENCE PROFILES... [Pg.247]

Fig. 3. The protein fold recognition protocol and fold prediction for complete genomes, (a) Construction of the FID library (b) fold prediction for proteins encoded in complete genomes. [Pg.259]


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Amino acids fold recognition

Fold Recognition and Threading

Fold recognition amino acid substitution

Fold recognition implications

Fold recognition modeling

Fold recognition overview

Fold-recognition algorithms

Protein fold recognition

Protein folding fold recognition procedure

Protein folding recognition using sequence profiles

Protein structure fold recognition

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