Esters crystal structures

Phosphate ester crystal structures have been determined of zinc 1,5,9-triazacyclononane including an interesting structure containing an oligophosphate bridged zinc unit.450 The zinc complex of 1,5,9-triazacyclododecane was studied as a hydrolysis catalyst for substituted phenyl acetates.451 Kinetic analysis suggested that hydrolysis occurs by a mechanism involving hydroxide attack of a metal-bound carbonyl. 

The crystal structure of the adduct of titanium tetrachloride and the ester formed from ethyl 2-hydroxypropanoate (ethyl lactate) and acrylic acid has been solved. It is a chelated structure with the oxygen donor atoms being incorporated into the titanium coordination sphere along with the four chloride anions. 

Conversely, when A-alkyl tryptophan methyl esters were condensed with aldehydes, the trans diastereomers were observed as the major products." X-ray-crystal structures of 1,2,3-trisubstituted tetrahydro-P-carbolines revealed that the Cl substituent preferentially adopted a pseudo-axial position, forcing the C3 substituent into a pseudo-equatorial orientation to give the kinetically and thermodynamically preferred trans isomer." As the steric size of the Cl and N2 substituents increased, the selectivity for the trans isomer became greater. A-alkyl-L-tryptophan methyl ester 42 was condensed with various aliphatic aldehydes in the presence of trifluoroacetic acid to give predominantly the trans isomers. ... 

Qiu X, Mistry A, Ammirati MJ et al (2007) Crystal structure of cholesteryl ester transfer protein reveals a long tunnel and four bound lipid molecules. Nat Struct Mol Biol 14 106-113... 

The polymer = 8.19 dlg in hexafluoro-2-propanol, HFIP, solution) in Figs 1 and 2 is prepared on photoirradiation by a 500 W super-high-pressure Hg lamp for several hours and subjected to the measurements without purification. The nmr peaks in Fig. 1 (5 9.36, 8.66 and 8.63, pyrazyl 7.35 and 7.23, phenylene 5.00, 4.93, 4.83 and 4.42, cyclobutane 4.05 and 1.10, ester) correspond precisely to the polymer structure which is predicted from the crystal structure of the monomer. The outstanding sharpness of all the peaks in this spectrum indicates that the photoproduct has few defects in its chemical structure. The X-ray patterns of the monomer and polymer in Fig. 2 show that they are nearly comparable to each other in crystallinity. These results indicate a strictly crystal-lattice controlled process for the four-centre-type photopolymerization of the [l OEt] crystal. 

In a comparison of fluorescence spectra between the ester and thioester derivative crystals of PDA, the ester crystal shows a strong emission whereas the thioester crystal fluoresces much more weakly. For example, the intensity of a PDA methyl thioester crystal is about one-thousandth of that of a PDA methyl ester crystal. Furthermore, the fluorescence lifetime of mixed crystals which consist of a large amount of PDA methyl ester and a small amount of the corresponding thioester moiety is much shortened, compared to the lifetime of pure PDA methyl ester crystals. In quenching experiments in solutions of PDA ester, the fluorescence of the PDA ester is dramatically quenched by thioacetate. Similar behaviour has been obtained with several types of diolefin derivatives having a thioester moiety, where crystal structures are isomorphous with the corresponding ester derivatives. 

Fig. 14 Crystal structure of 2 OEt-2 OPr. Two molecules making a pair (B and C) and two neighbouring molecules in the other pairs (A and D) viewed along the phenylene groups in molecules B and C. All the ester alkyl moieties are depicted by an ethyl group.

If it were not for a number of crystal structures that unambiguously confirmed the structures of the products, it would be easy to believe that some of the structural assignments were incorrect. At present no completely satisfactory explanation for these results is available. Examples of the reactions with esters are given in Scheme 21. 

The crystal structure of chloro-pentamethylcyclopentadienyl-S-leucyl-S-leucyl methyl ester-iridium(III), (86), indicates that the Ir—N(NH2-linkage) is longer (2.129 A) than that to the deprotonated peptide N atom (2.090 A).131... 

The crystal structure of the C-functionalized imidazole derivative of 1,5,9-triazcyclododecane (75) shows a five-coordinate zinc with four /V-donors from ligand and chloride in a distorted trigonal bipyramidal arrangement. The Zn—N imidazole bonds are the shortest at 2.025(3) A.678 Deprotonation of the imidazole group resulted in a bridging imidazolate to form dinuclear zinc complexes. The pATa of 10.3 varies from the pATa of bound water with similar ligands (as low as 7.3) and the complex is not catalytic for the hydrolysis of esters. 

The amino acid complexes [TcNCl(L)(PPh3)] (HL=L-cysteine, L-cysteine ethyl ester, cysteamine) have been prepared from [TcNC PPlfj ] or ASPI14 [TcNCU]/PPh3 [88]. The crystal structure of the L-cysteine ethyl ester complex 21 shows a Tc=N bond length of 1.605(3) A and the Tc atom displaced by 0.594(1) A above the square basal plane [88]. Other structurally characterized examples are the square pyramidal 22 with ONSP coordination and Tc=N 1.611(3) A [81], and 23 with NSPC1 coordination and Tc=N 1.615(7) A [89],... 

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