Enzyme-catalyzed reactions, kinetics soluble substrates

Typical kinetic analyses of enzyme-substrate systems are based on observed rates of enzyme-catalyzed reactions over a range of enzyme and substrate concentrations. Analyses of this type are commonplace for soluble enzyme-soluble substrate systems in which measures of substrate and... 

The kinetics of the D-glucose-D-fructose isomerization reaction catalyzed by soluble D-glucose isomerase at a specified concentration of substrate can be related to a simple concept of an enzyme-catalyzed, reversible reaction. 

Kinetic models to describe lipase-catalyzed reaction mechanisms have been proposed, and most have been extensions of the model developed by Michaelis and Menten (1913). However, normal Michaelis-Menten kinetics do not apply to lipase-induced changes, because the substrates (lipids) are not water-soluble and the enzyme operates at an interface (Brockman, 1984). However, rate expressions for the hydrolysis of emulsified lipids catalyzed by immobilized lipases resemble the rate expressions modeled with Michaelis-Menten mechanisms (Benzonana and Desnuelle, 1965). The kinetics and mechanisms of reactions catalyzed by immobilized lipases have been reviewed by Malcata et al. (1990 1992). 

In contrast to the equilibrium-controlled approach which ends with a true equUibrium, in the protease-catalyzed kinetically controlled synthesisf l the product appearing with the highest rate and disappearing with the lowest velocity would accumulate. This approach requires the use of acyl donor esters as carboxy components (Ac-X) and is limited to proteases which rapidly form an acyl-enzyme intermediate (Ac-E). Serine and cysteine proteases are known to catalyze acyl transfer from specific substrates to various nucleophihc amino components via an acyl-enzyme intermediate. In reactions of this type, the protease reacts rapidly with an amino acid or peptide ester, Ac-X, to form a covalent acyl-enzyme intermediate, Ac-E, that reacts, in competition with water, with the amino acid or peptide-derived nucleophile HN to form a new peptide bond (Scheme 3). The partitioning of the acyl-enzyme intermediate between water and the added nucleophile is the rate-limiting step. Under kinetic control, and if k4[HN] k3[H20], the peptide product Ac-N should accumulate. However, the soluble peptide product will be degraded if the reaction is not terminated after the acyl donor ester is consumed. 

Milller and co-workers recently developed an enantioselective benzoin dimerization using purified enzymes from Pseudomonas. The thiamine diphosphate (ThDP) dependent enzymes benzaldehyde lyase (BAL) and benzoylformate decarboxylase (BED) were found to catalyze the reversible benzoin condensation of aromatic aldehydes. The reaction is driven in the forward direction by the poor solubility of the benzoin products in aqueous media. A wide variety of aromatic aldehydes are accepted by BAL, and products of the (/ )-configuration are produced in excellent yield and enantiomeric purity. The (S)-enantiomer of benzoin is also available in high enantiomeric purity from a BAL-catalyzed kinetic resolution of rac-benzoin. In the presence of excess acetaldehyde, BAL selectively converts (i )-benzoin into (/ )-2-hydroxy-l-phenylpropanone, while the (iS)-benzoin enantiomer is not a substrate for the enzyme. At 49% conversion, (5)-benzoin is resolved to > 99% ee. BED can produce (i )-benzoin from benzaldehyde in comparable yield and enantiomeric purity with respect to BAL, but the substrate scope appears more limited. ... 

---