Cytosolic proteolysis

Disorders caused by misfolded mutant proteins that fail to pass the quality control system of the ER (e.g., mutations of the cystic fibrosis transmembrane regulator protein (CFTR) causing cystic fibrosis). The mutant proteins are retrotranslocated into the cytosol and finally subjected to proteolysis. In some... 

Although extensive biochemical data on both the bacterial and eukaryotic ATP-dependent proteases are available, the characterization of these proteolytic machines at atomic resolution has proven difficult, because of both the large size of these complexes and their lability to proteolysis and dissociation. No structural data at all are currently available for Lon and the mitochondrial ATP-dependent proteases. In the case of the cytosolic, membrane-integrated bacterial protease FtsH, atomic resolution data are available only for the ATPase domain (Krzywda et al. 2002 Niwa et al. 2002). In contrast, the ATP-dependent activators of the ClpAP and ClpXP proteolytic machines have so far resisted crystallization. Atomic resolution data are available only for the proteolytic component ClpP (Wang et al. 1997), and separately for a ClpX monomer (Kim and Kim 2003) and a ClpA monomer (Guo et al. 2002b). 

A calpain inhibitor, the DPK of N-dimethyltyrosine, was isolated from Streptomyces griseus and this compound showed activity in the calpain assay as described by Alvarez etal Calpain is a cytosolic protease regulated by calcium and is distributed in mammalian and avian cells. Calpain catalyzes proteolysis of target protein in cells, causing changes in metabolic processes such as the activation of protein kinase C, neuropeptide metabolism, and the activation of platelets. It is proposed that these inhibitors can be used in the treatment of neurodegen-erative diseases. 

Schulz, J.G., Annaert, W., Vandkerckhove, J., Zimmermann, P., De Strooper, B., David, G. (2003) Syndecan 3 intramembrane proteolysis is presenilin/y-secretase-dependent and modulates cytosolic signaling. J. Biol. Chem., 278, 48651-48657. 

Mayer TU, Braun T, Jentsch, S (1998) Role of the proteasome in membrane extraction of a short-lived ER-transmembrane protein. EMBO ] 17 3251-3257 McCracken AA, Brodsky JL (1996) Assembly of ER-associated protein degradation in vitro dependence on cytosol, calnexin, and ATP. J Cell Biol 132 291-298 McDonald HB, Byers B (1997) A proteasome cap subunit required for spindle pole body duplication in yeast. J Cell Biol 137 539-553 McGee TP, Cheng HH, Kumagai H, Omura S, Simoni RD (1996) Degradation of 3-hydroxy-3-methylg utaryl-CoA reductase in endoplasmic reticulum membranes is accelerated as a result of increased susceptibility to proteolysis. J Biol Chem 271 25630-25638... 

FIGURE 12-50 Initial events of apoptosis. Receptors in the plasma membrane (Fas, TNF-R1) receive signals from outside the cell (the Fas ligand or tumor necrosis factor (TNF), respectively). Activated receptors foster interaction between the "death domain" (an 80 amino acid sequence) in Fas or TNF-R1 and a similar death domain in the cytosolic proteins FADD or TRADD. FADD activates a cytosolic protease, caspase 8, that proteolytically activates other cellular proteases. TRADD also activates proteases. The resulting proteolysis is a primary factor in cell death. 

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