Cycloheptaamylose cavity

As a simple model for the enzyme penicillinase, Tutt and Schwartz (1970, 1971) investigated the effect of cycloheptaamylose on the hydrolysis of a series of penicillins. As illustrated in Scheme III, the alkaline hydrolysis of penicillins is first-order in both substrate and hydroxide ion and proceeds with cleavage of the /3-lactam ring to produce penicilloic acid. In the presence of an excess of cycloheptaamylose, the rate of disappearance of penicillin follows saturation kinetics as the cycloheptaamylose concentration is varied. By analogy to the hydrolysis of the phenyl acetates, this saturation behavior may be explained by inclusion of the penicillin side chain (the R group) within the cycloheptaamylose cavity prior to nucleophilic attack by a cycloheptaamylose alkoxide ion at the /3-lactam carbonyl. The presence of a covalent intermediate on the reaction pathway, although not isolated, was implicated by the observation that the rate of disappearance of penicillin is always greater than the rate of appearance of free penicilloic acid. 

Hydrolyses of p-nitrophenyl and 2,4-dinitrophenyl sulfate are accelerated fourfold and eightfold, respectively, by cycloheptaamylose at pH 9.98 and 50.3° (Congdon and Bender, 1972). These accelerations have been attributed to stabilization of the transition state by delocalization of charge in the activated complex and have been interpreted as evidence for the induction of strain into the substrates upon inclusion within the cycloheptaamylose cavity. Alternatively, accelerated rates of hydrolysis of aryl sulfates may be derived from a microsolvent effect. A comparison of the effect of cycloheptaamylose with the effect of mixed 2-propanol-water solvents may be of considerable value in distinguishing between these possibilities. 

In relation to separation of nucleotides, Hoffman61 found that adenine nucleotides interacted most strongly with cycloheptaamylose, presumably by inclusion of the base within the cavity of cyclodextrin. When epichlorohydrin-cross-linked cycloheptaamylose gel was used as a stationary phase for nucleic acid chromatography, adenine-containing compounds were retarded most strongly. 

Recently, an example of cycloamylose-induced catalysis has been presented which may be attributed, in part, to a favorable conformational effect. The rates of decarboxylation of several unionized /3-keto acids are accelerated approximately six-fold by cycloheptaamylose (Table XV) (Straub and Bender, 1972). Unlike anionic decarboxylations, the rates of acidic decarboxylations are not highly solvent dependent. Relative to water, for example, the rate of decarboxylation of benzoylacetic acid is accelerated by a maximum of 2.5-fold in mixed 2-propanol-water solutions.6 Thus, if it is assumed that 2-propanol-water solutions accurately simulate the properties of the cycloamylose cavity, the observed rate accelerations cannot be attributed solely to a microsolvent effect. Since decarboxylations of unionized /3-keto acids proceed through a cyclic transition state (Scheme X), Straub and Bender suggested that an additional rate acceleration may be derived from preferential inclusion of the cyclic ground state conformer. This process effectively freezes the substrate in a reactive conformation and, in this case, complements the microsolvent effect. 

In contrast to the effect of cycloheptaamylose, cyclohexaamylose depresses the rates of decarboxylation of unionized 8-keto acids (Straub and Bender, 1972). Since conformational effects depend largely on the geometry of binding, it is not surprising to find high sensitivity to the size of the cycloamylose cavity. Apparently, the smaller cyclohexaamylose cavity cannot accomodate the cyclic transition state for acidic decarboxylations. 

In the full study [64], it was found that a lesser but similar effect was seen with j8-cyclodextrin (cycloheptaamylose), which has a larger cavity in which anisole is both more weakly and more flexibly bound. Within this looser complex, ortho chlorination is... 

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