Coordination spheres trigonal bipyramidal

Results from an array of methods, including X-ray absorption, EXAFS, esr and magnetic circular dichroism, suggest that in all ureases the active sites are a pair of Ni" atoms. In at least one urease,these are 350 pm apart and are bridged by a carboxylate group. One nickel is attached to 2 N atoms with a fourth site probably used for binding to urea. The second nickel has a trigonal bipyramidal coordination sphere. 

Several interesting observations have been made on this reaction. First, the rate of isomerization was found to be the same as the rate of dehydration. All attempts to dehydrate the starting complex by conventional techniques were found to lead to isomerization. On the basis of this and other evidence, the mechanism proposed involves the aquation in the complex followed by anation. In this process, water first displaces Cl- in the coordination sphere and then is displaced by the Cl-, possibly by an SN1 mechanism. A trigonal bipyramid transition state could account for the Cl- reentering the coordination sphere to give an cis product. The rate law for this reaction is of the form... 

In the context of the Marcus formulation, the lowering of the activation barrier in an inner-sphere process could arise from the reduction of the work term wp as a result of the strong interaction in the ionic products, e.g., [RitSn+ IrCU3 ] and [RitSn+TCNE ]. The electrostatic potential in such an ion pair is attractive and may cause the tetraalkyltin to achieve a quasi five-coordinate configuration in the precursor complex, reminiscent of a variety of trigonal bipyramidal structures already well-known for tin(IV) derivatives, i.e.,... 

The two dinuclear units are linked by /13-oxo and /i-carboxylato groups. The third position in the "coordination sphere" of the /13-oxo groups is occupied by an unusual 5 coordinate, trigonal bipyramidal iron atom. This is the only case known so far in oxo-iron aggregates. The /13-oxo bridge is of type B since the surrounding metal atoms form an isosceles triangle. 

Clark and Hartwell have prepared the but-3-enyl complex (CH2= =CHCH2CH2)3PRhCl (52) in which the Rh is again pentacoordinate, an X-ray study showing that the olefin groups are parallel to the equatorial plane of the trigonal bipyramidal coordination sphere as in RhBr-(tvpp). The complex shows a conductivity in methanol appropriate for ionization to LRh MeOH)+ Cl. ... 

Sharma and Reed, 1976)]. In proteins the coordination number 4 is most common, where the zinc ion is typically coordinated in tetrahedral or distorted tetrahedral fashion. The coordination polyhedron of structural zinc is dominated by cysteine thiolates, and the metal ion is typically sequestered from solvent by its molecular environment the coordination polyhedron of catalytic zinc is dominated by histidine ligands, and the metal ion is exposed to bulk solvent and typically binds a solvent molecule (Vallee and Auld, 1990). The inner-sphere coordination number of catalytic zinc may increase to 5 during the course of enzymatic turnover, and several five-coordinate zinc enzyme—substrate, enzyme product, and enzyme-inhibitor complexes have been studied by high-resolution X-ray crystallographic methods (reviewed by Matthews, 1988 Christianson and Lipscomb, 1989). The coordination polyhedron of zinc in five coordinate examples may tend toward either trigonal bipyramid or octahedral-minus-one geometry. 

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