Common representative intermediates mechanism

Watson LA, Shallcross DE, Utembe SR, Jenkin ME (2008) A Common Representative Intermediates (CRI) mechanism for VOC degradation. Part 2 gas phase mechanism reduction. Atmos Environ 42 7196-7204... 

Jay, L.O., Sandu, A., Potra, F.A., Carmichael, G.R. Improved quasi-steady-state-approximation methods for atmospheric chemistry integration. SIAM J. Sci. Comput. 18, 182-202 (1997) Jenkin, M.E., Watson, L.A., Utembe, S.R., Shallcross, D.E. A Common Representative Intermediates (CRI) mechanism for VOC degradation. Part 1 Gas phase mechanism development. Atmos. Environ. 42, 7185-7195 (2008)... 

Each of these variables will be considered in this book. We start with concentrations, because they determine the form of the rate law when other variables are held constant. The concentration dependences reveal possibilities for the reaction scheme the sequence of elementary reactions showing the progression of steps and intermediates. Some authors, particularly biochemists, term this a kinetic mechanism, as distinct from the chemical mechanism. The latter describes the stereochemistry, electron flow (commonly represented by curved arrows on the Lewis structure), etc. 

In the first mechanism the excimer is represented as a common intermediate for the formation of dimer and the deactivation of the excited anthracene. In the second, excimer formation is totally nonproductive with regard to dimer formation. Again as in paragraph (b) one can think of the excimer in the second mechanism as having a structure that, if dimerization proceeded, would yield the unobserved head-to-head product ... 

For illustration, we consider a simplified treatment of methane oxidative coupling in which ethane (desired product) and CO, (undesired) are produced (Mims et al., 1995). This is an example of the effort (so far not commercially feasible) to convert CH, to products for use in chemical syntheses (so-called Q chemistry ). In this illustration, both C Hg and CO, are stable primary products (Section 5.6.2). Both arise from a common intermediate, CH, which is produced from CH4 by reaction with an oxidative agent, MO. Here, MO is treated as another gas-phase molecule, although in practice it is a solid. The reaction may be represented by parallel steps as in Figure 7.1(a), but a mechanism for it is better represented as in Figure 7.1(b). 

Lactamases (EC 3.5.2.6) inactivate /3-lactam antibiotics by hydrolyzing the amide bond (Fig. 5.1, Pathway b). These enzymes are the most important ones in the bacterial defense against /3-lactam antibiotics [15]. On the basis of catalytic mechanism, /3-lactamases can be subdivided into two major groups, namely Zn2+-containing metalloproteins (class B), and active-serine enzymes, which are subdivided into classes A, C, and D based on their amino acid sequences (see Chapt. 2). The metallo-enzymes are produced by only a relatively small number of pathogenic strains, but represent a potential threat for the future. Indeed, they are able to hydrolyze efficiently carbape-nems, which generally escape the activity of the more common serine-/3-lac-tamases [16] [17]. At present, however, most of the resistance of bacteria to /3-lactam antibiotics is due to the activity of serine-/3-lactamases. These enzymes hydrolyze the /3-lactam moiety via an acyl-enzyme intermediate similar to that formed by transpeptidases. The difference in the catalytic pathways of the two enzymes is merely quantitative (Fig. 5.1, Pathways a and b). 

The dissociative mechanism can explain both facts in that the hydrogen removed in the first step may recombine with an isomeric form of the ally lie intermediate to yield the isomeric olefin. Apparently syn and anti 7T-allylic complexes [67, 68) retain their configurations unless each may be converted into a common a-bonded complex in which the nonterminal carbon atoms of the allyl group are connected by a single bond and the isomerization of the intermediate can be represented as in Fig. 11. However, the recombination of the hydrogen atom with the allylic intermediate must be faster than the rate at which it enters the surface pool of... 

Hydrolysis and condensation reactions of silanes may be considered in the broad category of nucleophilic substitutions at silicon. The common nomenclature for these reactions is SN.V-Si, where A represents the kinetic order or molecularity, Si indicates that silicon is the reaction center, and SN indicates that the reaction is a nucleophilic substitution. Nucleophilic reactions at silicon have been reviewed thoroughly and have been the subject of fundamental studies by several laboratories over the last three decades [33]. The literature is not as voluminous as the literature on the corresponding reactions at carbon. A general mechanistic view of these reactions has, however, emerged. There are many parallels to carbon-centered reaction mechanisms. One distinction from carbon-centered reactions is clearly apparent. Silicon is able to form relatively stable higher coordinated (pentavalent) intermediates carbon is not [33]. 

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